Protein–RNA interactions for Protein: Q9H3W5

LRRN3, Leucine-rich repeat neuronal protein 3, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRN3Q9H3W5 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.53■□□□□ 0.24
LRRN3Q9H3W5 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.53■□□□□ 0.24
LRRN3Q9H3W5 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRN3Q9H3W5 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.53■□□□□ 0.24
LRRN3Q9H3W5 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRN3Q9H3W5 AC129492.6-201ENST00000611383 1305 ntBASIC16.53■□□□□ 0.24
LRRN3Q9H3W5 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRN3Q9H3W5 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.53■□□□□ 0.24
LRRN3Q9H3W5 TSEN15P1-201ENST00000423257 515 ntBASIC16.53■□□□□ 0.24
LRRN3Q9H3W5 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRN3Q9H3W5 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
LRRN3Q9H3W5 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
LRRN3Q9H3W5 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRN3Q9H3W5 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.53■□□□□ 0.24
LRRN3Q9H3W5 SLC25A6P2-201ENST00000497974 877 ntBASIC16.53■□□□□ 0.24
LRRN3Q9H3W5 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.53■□□□□ 0.24
LRRN3Q9H3W5 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRN3Q9H3W5 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRN3Q9H3W5 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LRRN3Q9H3W5 REXO1L3P-201ENST00000622202 1288 ntBASIC16.53■□□□□ 0.24
LRRN3Q9H3W5 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.53■□□□□ 0.24
LRRN3Q9H3W5 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRN3Q9H3W5 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRN3Q9H3W5 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRN3Q9H3W5 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRN3Q9H3W5 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
LRRN3Q9H3W5 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRN3Q9H3W5 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRN3Q9H3W5 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRN3Q9H3W5 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.53■□□□□ 0.24
LRRN3Q9H3W5 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRN3Q9H3W5 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRN3Q9H3W5 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRN3Q9H3W5 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRRN3Q9H3W5 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRN3Q9H3W5 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
LRRN3Q9H3W5 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRRN3Q9H3W5 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRN3Q9H3W5 AC006116.8-202ENST00000587620 1550 ntBASIC16.52■□□□□ 0.24
LRRN3Q9H3W5 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRN3Q9H3W5 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
LRRN3Q9H3W5 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRN3Q9H3W5 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
LRRN3Q9H3W5 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
LRRN3Q9H3W5 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRRN3Q9H3W5 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRRN3Q9H3W5 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.52■□□□□ 0.24
LRRN3Q9H3W5 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRRN3Q9H3W5 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRRN3Q9H3W5 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.52■□□□□ 0.24
LRRN3Q9H3W5 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.52■□□□□ 0.24
LRRN3Q9H3W5 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRRN3Q9H3W5 LINC02084-201ENST00000606069 1096 ntBASIC16.52■□□□□ 0.24
LRRN3Q9H3W5 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.52■□□□□ 0.24
LRRN3Q9H3W5 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.52■□□□□ 0.24
LRRN3Q9H3W5 AL513210.1-201ENST00000629608 234 ntBASIC16.52■□□□□ 0.24
LRRN3Q9H3W5 AC105339.1-204ENST00000636249 355 ntBASIC16.52■□□□□ 0.24
LRRN3Q9H3W5 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.52■□□□□ 0.24
LRRN3Q9H3W5 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRN3Q9H3W5 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRN3Q9H3W5 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRRN3Q9H3W5 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.52■□□□□ 0.23
LRRN3Q9H3W5 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
LRRN3Q9H3W5 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
LRRN3Q9H3W5 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRRN3Q9H3W5 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
LRRN3Q9H3W5 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRRN3Q9H3W5 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRRN3Q9H3W5 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRN3Q9H3W5 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRN3Q9H3W5 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.51■□□□□ 0.23
LRRN3Q9H3W5 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRN3Q9H3W5 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRN3Q9H3W5 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRN3Q9H3W5 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRN3Q9H3W5 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRN3Q9H3W5 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
LRRN3Q9H3W5 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
LRRN3Q9H3W5 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRN3Q9H3W5 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRN3Q9H3W5 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRN3Q9H3W5 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRN3Q9H3W5 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.51■□□□□ 0.23
LRRN3Q9H3W5 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.51■□□□□ 0.23
LRRN3Q9H3W5 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRN3Q9H3W5 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.51■□□□□ 0.23
LRRN3Q9H3W5 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRN3Q9H3W5 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRRN3Q9H3W5 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.51■□□□□ 0.23
LRRN3Q9H3W5 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.51■□□□□ 0.23
LRRN3Q9H3W5 AC112191.1-201ENST00000523689 701 ntBASIC16.51■□□□□ 0.23
LRRN3Q9H3W5 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.51■□□□□ 0.23
LRRN3Q9H3W5 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.51■□□□□ 0.23
LRRN3Q9H3W5 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.51■□□□□ 0.23
LRRN3Q9H3W5 AC106028.4-201ENST00000614509 607 ntBASIC16.51■□□□□ 0.23
LRRN3Q9H3W5 AC134043.2-201ENST00000624206 2238 ntBASIC16.51■□□□□ 0.23
LRRN3Q9H3W5 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRN3Q9H3W5 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRN3Q9H3W5 AC092919.2-201ENST00000623631 1645 ntBASIC16.51■□□□□ 0.23
LRRN3Q9H3W5 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms