Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.23■□□□□ 0.19
CNTNAP3Q9BZ76 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.23■□□□□ 0.19
CNTNAP3Q9BZ76 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CNTNAP3Q9BZ76 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNTNAP3Q9BZ76 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNTNAP3Q9BZ76 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNTNAP3Q9BZ76 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNTNAP3Q9BZ76 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CNTNAP3Q9BZ76 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNTNAP3Q9BZ76 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CNTNAP3Q9BZ76 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CNTNAP3Q9BZ76 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CNTNAP3Q9BZ76 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.23■□□□□ 0.19
CNTNAP3Q9BZ76 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CNTNAP3Q9BZ76 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNTNAP3Q9BZ76 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNTNAP3Q9BZ76 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
CNTNAP3Q9BZ76 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNTNAP3Q9BZ76 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNTNAP3Q9BZ76 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CNTNAP3Q9BZ76 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNTNAP3Q9BZ76 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNTNAP3Q9BZ76 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CNTNAP3Q9BZ76 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CNTNAP3Q9BZ76 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CNTNAP3Q9BZ76 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNTNAP3Q9BZ76 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
CNTNAP3Q9BZ76 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.22■□□□□ 0.19
CNTNAP3Q9BZ76 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.22■□□□□ 0.19
CNTNAP3Q9BZ76 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.22■□□□□ 0.19
CNTNAP3Q9BZ76 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNTNAP3Q9BZ76 RN7SL837P-201ENST00000463010 287 ntBASIC16.22■□□□□ 0.19
CNTNAP3Q9BZ76 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CNTNAP3Q9BZ76 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
CNTNAP3Q9BZ76 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.22■□□□□ 0.19
CNTNAP3Q9BZ76 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.22■□□□□ 0.19
CNTNAP3Q9BZ76 AC008494.3-201ENST00000606615 944 ntBASIC16.22■□□□□ 0.19
CNTNAP3Q9BZ76 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.22■□□□□ 0.19
CNTNAP3Q9BZ76 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.22■□□□□ 0.19
CNTNAP3Q9BZ76 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.22■□□□□ 0.19
CNTNAP3Q9BZ76 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.22■□□□□ 0.19
CNTNAP3Q9BZ76 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNTNAP3Q9BZ76 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CNTNAP3Q9BZ76 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.22■□□□□ 0.19
CNTNAP3Q9BZ76 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CNTNAP3Q9BZ76 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNTNAP3Q9BZ76 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CNTNAP3Q9BZ76 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CNTNAP3Q9BZ76 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CNTNAP3Q9BZ76 LTB4R2-202ENST00000528054 3092 ntBASIC16.22■□□□□ 0.19
CNTNAP3Q9BZ76 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.22■□□□□ 0.19
CNTNAP3Q9BZ76 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
CNTNAP3Q9BZ76 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
CNTNAP3Q9BZ76 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CNTNAP3Q9BZ76 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CNTNAP3Q9BZ76 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
CNTNAP3Q9BZ76 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNTNAP3Q9BZ76 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNTNAP3Q9BZ76 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.21■□□□□ 0.19
CNTNAP3Q9BZ76 AC097637.2-201ENST00000624096 1997 ntBASIC16.21■□□□□ 0.19
CNTNAP3Q9BZ76 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CNTNAP3Q9BZ76 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.21■□□□□ 0.19
CNTNAP3Q9BZ76 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.21■□□□□ 0.19
CNTNAP3Q9BZ76 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.21■□□□□ 0.19
CNTNAP3Q9BZ76 MBP-227ENST00000526111 581 ntTSL 4 BASIC16.21■□□□□ 0.19
CNTNAP3Q9BZ76 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.21■□□□□ 0.19
CNTNAP3Q9BZ76 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CNTNAP3Q9BZ76 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.21■□□□□ 0.19
CNTNAP3Q9BZ76 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CNTNAP3Q9BZ76 U62317.3-201ENST00000608319 855 ntBASIC16.21■□□□□ 0.19
CNTNAP3Q9BZ76 AC008738.7-201ENST00000609744 511 ntBASIC16.21■□□□□ 0.19
CNTNAP3Q9BZ76 SPDYE12P-201ENST00000618416 771 ntBASIC16.21■□□□□ 0.19
CNTNAP3Q9BZ76 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNTNAP3Q9BZ76 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNTNAP3Q9BZ76 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CNTNAP3Q9BZ76 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNTNAP3Q9BZ76 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CNTNAP3Q9BZ76 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNTNAP3Q9BZ76 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CNTNAP3Q9BZ76 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNTNAP3Q9BZ76 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
CNTNAP3Q9BZ76 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CNTNAP3Q9BZ76 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CNTNAP3Q9BZ76 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
CNTNAP3Q9BZ76 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CNTNAP3Q9BZ76 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CNTNAP3Q9BZ76 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CNTNAP3Q9BZ76 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNTNAP3Q9BZ76 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CNTNAP3Q9BZ76 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNTNAP3Q9BZ76 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.2■□□□□ 0.18
CNTNAP3Q9BZ76 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
CNTNAP3Q9BZ76 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNTNAP3Q9BZ76 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNTNAP3Q9BZ76 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.2■□□□□ 0.18
CNTNAP3Q9BZ76 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.2■□□□□ 0.18
CNTNAP3Q9BZ76 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNTNAP3Q9BZ76 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.2■□□□□ 0.18
CNTNAP3Q9BZ76 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNTNAP3Q9BZ76 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms