Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17■□□□□ 0.31
COL25A1Q9BXS0 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
COL25A1Q9BXS0 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17■□□□□ 0.31
COL25A1Q9BXS0 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17■□□□□ 0.31
COL25A1Q9BXS0 PGAM1P5-201ENST00000548011 764 ntBASIC17■□□□□ 0.31
COL25A1Q9BXS0 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
COL25A1Q9BXS0 AL033527.5-202ENST00000641632 1098 ntBASIC17■□□□□ 0.31
COL25A1Q9BXS0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
COL25A1Q9BXS0 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
COL25A1Q9BXS0 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL25A1Q9BXS0 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
COL25A1Q9BXS0 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL25A1Q9BXS0 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17■□□□□ 0.31
COL25A1Q9BXS0 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17■□□□□ 0.31
COL25A1Q9BXS0 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL25A1Q9BXS0 AL353732.1-201ENST00000569618 1459 ntBASIC16.99■□□□□ 0.31
COL25A1Q9BXS0 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
COL25A1Q9BXS0 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC16.99■□□□□ 0.31
COL25A1Q9BXS0 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.99■□□□□ 0.31
COL25A1Q9BXS0 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL25A1Q9BXS0 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COL25A1Q9BXS0 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL25A1Q9BXS0 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL25A1Q9BXS0 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COL25A1Q9BXS0 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COL25A1Q9BXS0 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.99■□□□□ 0.31
COL25A1Q9BXS0 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.99■□□□□ 0.31
COL25A1Q9BXS0 AL627389.1-201ENST00000413508 1182 ntBASIC16.99■□□□□ 0.31
COL25A1Q9BXS0 KRTAP19-9P-201ENST00000421795 191 ntBASIC16.99■□□□□ 0.31
COL25A1Q9BXS0 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.99■□□□□ 0.31
COL25A1Q9BXS0 AL591846.1-201ENST00000451736 433 ntBASIC16.99■□□□□ 0.31
COL25A1Q9BXS0 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.99■□□□□ 0.31
COL25A1Q9BXS0 FTH1P14-201ENST00000482930 551 ntBASIC16.99■□□□□ 0.31
COL25A1Q9BXS0 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.99■□□□□ 0.31
COL25A1Q9BXS0 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.99■□□□□ 0.31
COL25A1Q9BXS0 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC16.99■□□□□ 0.31
COL25A1Q9BXS0 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC16.99■□□□□ 0.31
COL25A1Q9BXS0 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.99■□□□□ 0.31
COL25A1Q9BXS0 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.99■□□□□ 0.31
COL25A1Q9BXS0 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
COL25A1Q9BXS0 CU633904.3-201ENST00000624042 1029 ntBASIC16.99■□□□□ 0.31
COL25A1Q9BXS0 AC008687.7-202ENST00000637404 953 ntBASIC16.99■□□□□ 0.31
COL25A1Q9BXS0 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.99■□□□□ 0.31
COL25A1Q9BXS0 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
COL25A1Q9BXS0 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL25A1Q9BXS0 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL25A1Q9BXS0 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COL25A1Q9BXS0 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COL25A1Q9BXS0 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL25A1Q9BXS0 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
COL25A1Q9BXS0 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL25A1Q9BXS0 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COL25A1Q9BXS0 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.99■□□□□ 0.31
COL25A1Q9BXS0 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.99■□□□□ 0.31
COL25A1Q9BXS0 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL25A1Q9BXS0 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
COL25A1Q9BXS0 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL25A1Q9BXS0 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
COL25A1Q9BXS0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL25A1Q9BXS0 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.98■□□□□ 0.31
COL25A1Q9BXS0 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL25A1Q9BXS0 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL25A1Q9BXS0 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL25A1Q9BXS0 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.98■□□□□ 0.31
COL25A1Q9BXS0 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL25A1Q9BXS0 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC16.98■□□□□ 0.31
COL25A1Q9BXS0 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.98■□□□□ 0.31
COL25A1Q9BXS0 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
COL25A1Q9BXS0 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC16.98■□□□□ 0.31
COL25A1Q9BXS0 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC16.98■□□□□ 0.31
COL25A1Q9BXS0 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC16.98■□□□□ 0.31
COL25A1Q9BXS0 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC16.98■□□□□ 0.31
COL25A1Q9BXS0 EEF1DP1-201ENST00000585891 896 ntBASIC16.98■□□□□ 0.31
COL25A1Q9BXS0 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
COL25A1Q9BXS0 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.98■□□□□ 0.31
COL25A1Q9BXS0 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.98■□□□□ 0.31
COL25A1Q9BXS0 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.98■□□□□ 0.31
COL25A1Q9BXS0 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL25A1Q9BXS0 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.98■□□□□ 0.31
COL25A1Q9BXS0 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL25A1Q9BXS0 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC16.98■□□□□ 0.31
COL25A1Q9BXS0 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL25A1Q9BXS0 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL25A1Q9BXS0 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL25A1Q9BXS0 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
COL25A1Q9BXS0 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL25A1Q9BXS0 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL25A1Q9BXS0 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL25A1Q9BXS0 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
COL25A1Q9BXS0 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
COL25A1Q9BXS0 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL25A1Q9BXS0 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL25A1Q9BXS0 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL25A1Q9BXS0 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.97■□□□□ 0.31
COL25A1Q9BXS0 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COL25A1Q9BXS0 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
COL25A1Q9BXS0 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COL25A1Q9BXS0 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.97■□□□□ 0.31
COL25A1Q9BXS0 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.97■□□□□ 0.31
COL25A1Q9BXS0 Z93015.1-201ENST00000451718 390 ntBASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms