Protein–RNA interactions for Protein: Q9BV40

VAMP8, Vesicle-associated membrane protein 8, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP8Q9BV40 REXO1L11P-201ENST00000620964 1927 ntBASIC12.49□□□□□ -0.41
VAMP8Q9BV40 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 MPST-204ENST00000404393 1329 ntTSL 5 BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 AC004987.1-201ENST00000428627 508 ntBASIC12.48□□□□□ -0.41
VAMP8Q9BV40 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC12.48□□□□□ -0.41
VAMP8Q9BV40 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 HLA-A-202ENST00000376806 1854 ntBASIC12.47□□□□□ -0.41
VAMP8Q9BV40 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 AC026396.1-201ENST00000419388 421 ntBASIC12.47□□□□□ -0.41
VAMP8Q9BV40 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 TPRG1LP1-201ENST00000598702 760 ntBASIC12.47□□□□□ -0.41
VAMP8Q9BV40 AL356740.2-201ENST00000601559 647 ntBASIC12.47□□□□□ -0.41
VAMP8Q9BV40 AC233992.3-201ENST00000607491 485 ntBASIC12.47□□□□□ -0.41
VAMP8Q9BV40 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VAMP8Q9BV40 AP005117.1-202ENST00000581724 1908 ntBASIC12.47□□□□□ -0.41
VAMP8Q9BV40 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
VAMP8Q9BV40 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC12.46□□□□□ -0.41
VAMP8Q9BV40 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
VAMP8Q9BV40 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms