Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAF4Q9BUZ4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAF4Q9BUZ4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.34■□□□□ 0.05
TRAF4Q9BUZ4 AC133963.1-201ENST00000504166 1679 ntBASIC15.34■□□□□ 0.05
TRAF4Q9BUZ4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAF4Q9BUZ4 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAF4Q9BUZ4 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TRAF4Q9BUZ4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRAF4Q9BUZ4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TRAF4Q9BUZ4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRAF4Q9BUZ4 AC104640.1-201ENST00000562617 2109 ntBASIC15.34■□□□□ 0.05
TRAF4Q9BUZ4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.34■□□□□ 0.05
TRAF4Q9BUZ4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.34■□□□□ 0.05
TRAF4Q9BUZ4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAF4Q9BUZ4 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
TRAF4Q9BUZ4 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAF4Q9BUZ4 HR-201ENST00000312841 5351 ntTSL 5 BASIC15.34■□□□□ 0.05
TRAF4Q9BUZ4 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.34■□□□□ 0.05
TRAF4Q9BUZ4 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
TRAF4Q9BUZ4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.33■□□□□ 0.05
TRAF4Q9BUZ4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAF4Q9BUZ4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
TRAF4Q9BUZ4 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAF4Q9BUZ4 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.33■□□□□ 0.05
TRAF4Q9BUZ4 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF4Q9BUZ4 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF4Q9BUZ4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF4Q9BUZ4 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF4Q9BUZ4 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF4Q9BUZ4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF4Q9BUZ4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TRAF4Q9BUZ4 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.33■□□□□ 0.04
TRAF4Q9BUZ4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAF4Q9BUZ4 FGFR3P6-201ENST00000457012 610 ntBASIC15.33■□□□□ 0.04
TRAF4Q9BUZ4 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.33■□□□□ 0.04
TRAF4Q9BUZ4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF4Q9BUZ4 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.33■□□□□ 0.04
TRAF4Q9BUZ4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF4Q9BUZ4 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.33■□□□□ 0.04
TRAF4Q9BUZ4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.33■□□□□ 0.04
TRAF4Q9BUZ4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAF4Q9BUZ4 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
TRAF4Q9BUZ4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF4Q9BUZ4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRAF4Q9BUZ4 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF4Q9BUZ4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF4Q9BUZ4 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRAF4Q9BUZ4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF4Q9BUZ4 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAF4Q9BUZ4 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF4Q9BUZ4 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRAF4Q9BUZ4 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF4Q9BUZ4 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF4Q9BUZ4 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRAF4Q9BUZ4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF4Q9BUZ4 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRAF4Q9BUZ4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF4Q9BUZ4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRAF4Q9BUZ4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF4Q9BUZ4 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF4Q9BUZ4 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF4Q9BUZ4 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAF4Q9BUZ4 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAF4Q9BUZ4 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF4Q9BUZ4 AC023824.1-201ENST00000562945 2975 ntBASIC15.32■□□□□ 0.04
TRAF4Q9BUZ4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAF4Q9BUZ4 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAF4Q9BUZ4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF4Q9BUZ4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAF4Q9BUZ4 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF4Q9BUZ4 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRAF4Q9BUZ4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.32■□□□□ 0.04
TRAF4Q9BUZ4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF4Q9BUZ4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.32■□□□□ 0.04
TRAF4Q9BUZ4 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.32■□□□□ 0.04
TRAF4Q9BUZ4 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAF4Q9BUZ4 AC093909.1-201ENST00000504731 1122 ntBASIC15.32■□□□□ 0.04
TRAF4Q9BUZ4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.32■□□□□ 0.04
TRAF4Q9BUZ4 AC073648.2-201ENST00000510116 352 ntBASIC15.32■□□□□ 0.04
TRAF4Q9BUZ4 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAF4Q9BUZ4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.32■□□□□ 0.04
TRAF4Q9BUZ4 MTDHP3-201ENST00000594186 672 ntBASIC15.32■□□□□ 0.04
TRAF4Q9BUZ4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAF4Q9BUZ4 AC023511.2-201ENST00000618803 211 ntBASIC15.32■□□□□ 0.04
TRAF4Q9BUZ4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAF4Q9BUZ4 AC148477.8-201ENST00000624298 468 ntBASIC15.32■□□□□ 0.04
TRAF4Q9BUZ4 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.32■□□□□ 0.04
TRAF4Q9BUZ4 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF4Q9BUZ4 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF4Q9BUZ4 IL9RP2-201ENST00000423948 1312 ntBASIC15.32■□□□□ 0.04
TRAF4Q9BUZ4 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAF4Q9BUZ4 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAF4Q9BUZ4 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF4Q9BUZ4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAF4Q9BUZ4 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF4Q9BUZ4 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAF4Q9BUZ4 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAF4Q9BUZ4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TRAF4Q9BUZ4 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRAF4Q9BUZ4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms