Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 AC010460.3-201ENST00000511359 1579 ntBASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 AC132872.4-202ENST00000622924 2756 ntBASIC14.67□□□□□ -0.06
CMSS1Q9BQ75 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.66□□□□□ -0.06
CMSS1Q9BQ75 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CMSS1Q9BQ75 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CMSS1Q9BQ75 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CMSS1Q9BQ75 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.66□□□□□ -0.06
CMSS1Q9BQ75 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
CMSS1Q9BQ75 LINC02228-204ENST00000642115 2962 ntBASIC14.66□□□□□ -0.06
CMSS1Q9BQ75 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CMSS1Q9BQ75 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CMSS1Q9BQ75 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CMSS1Q9BQ75 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.66□□□□□ -0.06
CMSS1Q9BQ75 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CMSS1Q9BQ75 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CMSS1Q9BQ75 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CMSS1Q9BQ75 LGALS8-AS1-201ENST00000487567 1457 ntBASIC14.66□□□□□ -0.06
CMSS1Q9BQ75 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CMSS1Q9BQ75 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CMSS1Q9BQ75 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.66□□□□□ -0.06
CMSS1Q9BQ75 SLC25A1P3-201ENST00000395415 828 ntBASIC14.66□□□□□ -0.06
CMSS1Q9BQ75 AC087499.1-201ENST00000418141 1075 ntBASIC14.66□□□□□ -0.06
CMSS1Q9BQ75 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC14.66□□□□□ -0.06
CMSS1Q9BQ75 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CMSS1Q9BQ75 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.66□□□□□ -0.06
CMSS1Q9BQ75 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CMSS1Q9BQ75 SNX5-210ENST00000481323 562 ntTSL 3 BASIC14.66□□□□□ -0.06
CMSS1Q9BQ75 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC14.66□□□□□ -0.06
CMSS1Q9BQ75 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.66□□□□□ -0.06
CMSS1Q9BQ75 AC005332.3-201ENST00000589904 676 ntBASIC14.66□□□□□ -0.06
CMSS1Q9BQ75 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC14.66□□□□□ -0.06
CMSS1Q9BQ75 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CMSS1Q9BQ75 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CMSS1Q9BQ75 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CMSS1Q9BQ75 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CMSS1Q9BQ75 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CMSS1Q9BQ75 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CMSS1Q9BQ75 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CMSS1Q9BQ75 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.66□□□□□ -0.06
CMSS1Q9BQ75 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CMSS1Q9BQ75 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.66□□□□□ -0.06
CMSS1Q9BQ75 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CMSS1Q9BQ75 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC14.66□□□□□ -0.06
CMSS1Q9BQ75 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CMSS1Q9BQ75 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CMSS1Q9BQ75 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CMSS1Q9BQ75 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
CMSS1Q9BQ75 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.65□□□□□ -0.06
CMSS1Q9BQ75 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CMSS1Q9BQ75 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CMSS1Q9BQ75 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CMSS1Q9BQ75 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CMSS1Q9BQ75 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CMSS1Q9BQ75 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CMSS1Q9BQ75 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CMSS1Q9BQ75 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.65□□□□□ -0.06
CMSS1Q9BQ75 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CMSS1Q9BQ75 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.65□□□□□ -0.06
CMSS1Q9BQ75 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CMSS1Q9BQ75 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CMSS1Q9BQ75 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CMSS1Q9BQ75 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
CMSS1Q9BQ75 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CMSS1Q9BQ75 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CMSS1Q9BQ75 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CMSS1Q9BQ75 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CMSS1Q9BQ75 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.65□□□□□ -0.06
CMSS1Q9BQ75 BX664615.1-201ENST00000443558 458 ntBASIC14.65□□□□□ -0.06
CMSS1Q9BQ75 YBX1P2-201ENST00000489612 999 ntBASIC14.65□□□□□ -0.06
CMSS1Q9BQ75 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC14.65□□□□□ -0.06
CMSS1Q9BQ75 DET1-205ENST00000558413 583 ntTSL 4 BASIC14.65□□□□□ -0.06
CMSS1Q9BQ75 AC109462.3-201ENST00000573934 613 ntBASIC14.65□□□□□ -0.06
CMSS1Q9BQ75 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.65□□□□□ -0.06
CMSS1Q9BQ75 FGF14-AS2-201ENST00000606448 1074 ntBASIC14.65□□□□□ -0.06
CMSS1Q9BQ75 AC139887.4-201ENST00000607877 719 ntBASIC14.65□□□□□ -0.06
CMSS1Q9BQ75 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CMSS1Q9BQ75 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CMSS1Q9BQ75 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CMSS1Q9BQ75 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.65□□□□□ -0.06
CMSS1Q9BQ75 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CMSS1Q9BQ75 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CMSS1Q9BQ75 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CMSS1Q9BQ75 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CMSS1Q9BQ75 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms