Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NOTCH4Q99466 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.39■□□□□ 0.37
NOTCH4Q99466 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
NOTCH4Q99466 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
NOTCH4Q99466 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
NOTCH4Q99466 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NOTCH4Q99466 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
NOTCH4Q99466 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NOTCH4Q99466 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NOTCH4Q99466 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.38■□□□□ 0.37
NOTCH4Q99466 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NOTCH4Q99466 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.38■□□□□ 0.37
NOTCH4Q99466 AC025048.6-201ENST00000634326 1161 ntBASIC17.38■□□□□ 0.37
NOTCH4Q99466 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NOTCH4Q99466 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.38■□□□□ 0.37
NOTCH4Q99466 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NOTCH4Q99466 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
NOTCH4Q99466 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NOTCH4Q99466 TOP3BP1-201ENST00000420768 1380 ntBASIC17.38■□□□□ 0.37
NOTCH4Q99466 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
NOTCH4Q99466 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.38■□□□□ 0.37
NOTCH4Q99466 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NOTCH4Q99466 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NOTCH4Q99466 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.38■□□□□ 0.37
NOTCH4Q99466 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.38■□□□□ 0.37
NOTCH4Q99466 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.38■□□□□ 0.37
NOTCH4Q99466 AC007967.4-201ENST00000614700 386 ntBASIC17.38■□□□□ 0.37
NOTCH4Q99466 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NOTCH4Q99466 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.38■□□□□ 0.37
NOTCH4Q99466 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NOTCH4Q99466 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.38■□□□□ 0.37
NOTCH4Q99466 AC022144.1-201ENST00000602255 1580 ntBASIC17.38■□□□□ 0.37
NOTCH4Q99466 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
NOTCH4Q99466 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
NOTCH4Q99466 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.37■□□□□ 0.37
NOTCH4Q99466 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.37■□□□□ 0.37
NOTCH4Q99466 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NOTCH4Q99466 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.37■□□□□ 0.37
NOTCH4Q99466 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.37■□□□□ 0.37
NOTCH4Q99466 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.37■□□□□ 0.37
NOTCH4Q99466 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NOTCH4Q99466 PRYP6-201ENST00000514804 343 ntBASIC17.37■□□□□ 0.37
NOTCH4Q99466 IGHV3-42-201ENST00000520410 361 ntBASIC17.37■□□□□ 0.37
NOTCH4Q99466 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.37■□□□□ 0.37
NOTCH4Q99466 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.37■□□□□ 0.37
NOTCH4Q99466 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NOTCH4Q99466 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NOTCH4Q99466 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NOTCH4Q99466 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.37■□□□□ 0.37
NOTCH4Q99466 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NOTCH4Q99466 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NOTCH4Q99466 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NOTCH4Q99466 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NOTCH4Q99466 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NOTCH4Q99466 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NOTCH4Q99466 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NOTCH4Q99466 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NOTCH4Q99466 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NOTCH4Q99466 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NOTCH4Q99466 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NOTCH4Q99466 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NOTCH4Q99466 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
NOTCH4Q99466 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
NOTCH4Q99466 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NOTCH4Q99466 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NOTCH4Q99466 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.37■□□□□ 0.37
NOTCH4Q99466 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NOTCH4Q99466 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.37■□□□□ 0.37
NOTCH4Q99466 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.37■□□□□ 0.37
NOTCH4Q99466 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.37■□□□□ 0.37
NOTCH4Q99466 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
NOTCH4Q99466 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.37■□□□□ 0.37
NOTCH4Q99466 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NOTCH4Q99466 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.37■□□□□ 0.37
NOTCH4Q99466 SPDYE12P-201ENST00000618416 771 ntBASIC17.37■□□□□ 0.37
NOTCH4Q99466 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NOTCH4Q99466 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.36■□□□□ 0.37
NOTCH4Q99466 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NOTCH4Q99466 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NOTCH4Q99466 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NOTCH4Q99466 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.36■□□□□ 0.37
NOTCH4Q99466 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.36■□□□□ 0.37
NOTCH4Q99466 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
NOTCH4Q99466 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NOTCH4Q99466 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
NOTCH4Q99466 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.36■□□□□ 0.37
NOTCH4Q99466 AC005034.1-201ENST00000426657 489 ntBASIC17.36■□□□□ 0.37
NOTCH4Q99466 HLA-J-202ENST00000469281 1241 ntBASIC17.36■□□□□ 0.37
NOTCH4Q99466 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.36■□□□□ 0.37
NOTCH4Q99466 AC124947.2-201ENST00000547118 1133 ntBASIC17.36■□□□□ 0.37
NOTCH4Q99466 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.36■□□□□ 0.37
NOTCH4Q99466 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.36■□□□□ 0.37
NOTCH4Q99466 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.36■□□□□ 0.37
NOTCH4Q99466 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NOTCH4Q99466 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NOTCH4Q99466 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NOTCH4Q99466 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NOTCH4Q99466 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NOTCH4Q99466 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NOTCH4Q99466 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms