Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
SYNGAP1Q96PV0 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SYNGAP1Q96PV0 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.35■□□□□ 0.69
SYNGAP1Q96PV0 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.35■□□□□ 0.69
SYNGAP1Q96PV0 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.35■□□□□ 0.69
SYNGAP1Q96PV0 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SYNGAP1Q96PV0 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SYNGAP1Q96PV0 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SYNGAP1Q96PV0 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SYNGAP1Q96PV0 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SYNGAP1Q96PV0 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SYNGAP1Q96PV0 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SYNGAP1Q96PV0 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.34■□□□□ 0.69
SYNGAP1Q96PV0 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SYNGAP1Q96PV0 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
SYNGAP1Q96PV0 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
SYNGAP1Q96PV0 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SYNGAP1Q96PV0 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SYNGAP1Q96PV0 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SYNGAP1Q96PV0 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.34■□□□□ 0.69
SYNGAP1Q96PV0 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.34■□□□□ 0.69
SYNGAP1Q96PV0 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.34■□□□□ 0.69
SYNGAP1Q96PV0 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.34■□□□□ 0.69
SYNGAP1Q96PV0 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.34■□□□□ 0.69
SYNGAP1Q96PV0 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.34■□□□□ 0.69
SYNGAP1Q96PV0 MIR4515-201ENST00000584082 81 ntBASIC19.34■□□□□ 0.69
SYNGAP1Q96PV0 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.34■□□□□ 0.69
SYNGAP1Q96PV0 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SYNGAP1Q96PV0 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.34■□□□□ 0.69
SYNGAP1Q96PV0 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.34■□□□□ 0.69
SYNGAP1Q96PV0 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SYNGAP1Q96PV0 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SYNGAP1Q96PV0 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SYNGAP1Q96PV0 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.34■□□□□ 0.69
SYNGAP1Q96PV0 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SYNGAP1Q96PV0 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SYNGAP1Q96PV0 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SYNGAP1Q96PV0 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SYNGAP1Q96PV0 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SYNGAP1Q96PV0 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SYNGAP1Q96PV0 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.33■□□□□ 0.69
SYNGAP1Q96PV0 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SYNGAP1Q96PV0 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.33■□□□□ 0.69
SYNGAP1Q96PV0 AC067863.1-201ENST00000494933 530 ntBASIC19.33■□□□□ 0.69
SYNGAP1Q96PV0 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SYNGAP1Q96PV0 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SYNGAP1Q96PV0 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.33■□□□□ 0.69
SYNGAP1Q96PV0 AC005498.2-205ENST00000593218 784 ntBASIC19.33■□□□□ 0.69
SYNGAP1Q96PV0 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.33■□□□□ 0.69
SYNGAP1Q96PV0 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SYNGAP1Q96PV0 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SYNGAP1Q96PV0 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
SYNGAP1Q96PV0 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.33■□□□□ 0.68
SYNGAP1Q96PV0 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
SYNGAP1Q96PV0 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SYNGAP1Q96PV0 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SYNGAP1Q96PV0 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SYNGAP1Q96PV0 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.33■□□□□ 0.68
SYNGAP1Q96PV0 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.33■□□□□ 0.68
SYNGAP1Q96PV0 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SYNGAP1Q96PV0 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SYNGAP1Q96PV0 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SYNGAP1Q96PV0 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SYNGAP1Q96PV0 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNGAP1Q96PV0 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNGAP1Q96PV0 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
SYNGAP1Q96PV0 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC19.32■□□□□ 0.68
SYNGAP1Q96PV0 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNGAP1Q96PV0 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.32■□□□□ 0.68
SYNGAP1Q96PV0 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.32■□□□□ 0.68
SYNGAP1Q96PV0 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.32■□□□□ 0.68
SYNGAP1Q96PV0 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SYNGAP1Q96PV0 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.32■□□□□ 0.68
SYNGAP1Q96PV0 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
SYNGAP1Q96PV0 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.32■□□□□ 0.68
SYNGAP1Q96PV0 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SYNGAP1Q96PV0 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.32■□□□□ 0.68
SYNGAP1Q96PV0 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SYNGAP1Q96PV0 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.32■□□□□ 0.68
SYNGAP1Q96PV0 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNGAP1Q96PV0 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.32■□□□□ 0.68
SYNGAP1Q96PV0 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNGAP1Q96PV0 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNGAP1Q96PV0 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
SYNGAP1Q96PV0 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNGAP1Q96PV0 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNGAP1Q96PV0 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNGAP1Q96PV0 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SYNGAP1Q96PV0 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SYNGAP1Q96PV0 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SYNGAP1Q96PV0 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNGAP1Q96PV0 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SYNGAP1Q96PV0 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.32■□□□□ 0.68
SYNGAP1Q96PV0 AKAP8P1-201ENST00000434743 1349 ntBASIC19.32■□□□□ 0.68
SYNGAP1Q96PV0 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.32■□□□□ 0.68
SYNGAP1Q96PV0 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SYNGAP1Q96PV0 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.31■□□□□ 0.68
SYNGAP1Q96PV0 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SYNGAP1Q96PV0 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SYNGAP1Q96PV0 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms