Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.19□□□□□ -0.14
GAFA1Q96PS6 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 AC004790.2-201ENST00000623588 572 ntBASIC14.19□□□□□ -0.14
GAFA1Q96PS6 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 AC022211.2-201ENST00000585075 2527 ntBASIC14.19□□□□□ -0.14
GAFA1Q96PS6 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 AL021920.2-201ENST00000624828 1351 ntBASIC14.19□□□□□ -0.14
GAFA1Q96PS6 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
GAFA1Q96PS6 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GAFA1Q96PS6 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
GAFA1Q96PS6 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GAFA1Q96PS6 TUBB8P12-201ENST00000308911 1335 ntBASIC14.18□□□□□ -0.14
GAFA1Q96PS6 IL9RP2-201ENST00000423948 1312 ntBASIC14.18□□□□□ -0.14
GAFA1Q96PS6 TUBB7P-202ENST00000428444 1305 ntBASIC14.18□□□□□ -0.14
GAFA1Q96PS6 TUBB8P7-204ENST00000567960 1332 ntBASIC14.18□□□□□ -0.14
GAFA1Q96PS6 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.18□□□□□ -0.14
GAFA1Q96PS6 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GAFA1Q96PS6 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GAFA1Q96PS6 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
GAFA1Q96PS6 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.18□□□□□ -0.14
GAFA1Q96PS6 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.18□□□□□ -0.14
GAFA1Q96PS6 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GAFA1Q96PS6 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GAFA1Q96PS6 MRPL20P1-201ENST00000400819 433 ntBASIC14.18□□□□□ -0.14
GAFA1Q96PS6 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
GAFA1Q96PS6 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.18□□□□□ -0.14
GAFA1Q96PS6 AC009947.1-201ENST00000444350 727 ntBASIC14.18□□□□□ -0.14
GAFA1Q96PS6 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.18□□□□□ -0.14
GAFA1Q96PS6 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.18□□□□□ -0.14
GAFA1Q96PS6 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.18□□□□□ -0.14
GAFA1Q96PS6 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.18□□□□□ -0.14
GAFA1Q96PS6 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GAFA1Q96PS6 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
GAFA1Q96PS6 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GAFA1Q96PS6 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.18□□□□□ -0.14
GAFA1Q96PS6 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.18□□□□□ -0.14
GAFA1Q96PS6 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.18□□□□□ -0.14
GAFA1Q96PS6 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GAFA1Q96PS6 AC005915.1-201ENST00000624912 2018 ntBASIC14.18□□□□□ -0.14
GAFA1Q96PS6 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
GAFA1Q96PS6 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
GAFA1Q96PS6 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GAFA1Q96PS6 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GAFA1Q96PS6 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GAFA1Q96PS6 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
GAFA1Q96PS6 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
GAFA1Q96PS6 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.18□□□□□ -0.14
GAFA1Q96PS6 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GAFA1Q96PS6 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GAFA1Q96PS6 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
GAFA1Q96PS6 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GAFA1Q96PS6 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GAFA1Q96PS6 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GAFA1Q96PS6 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
GAFA1Q96PS6 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GAFA1Q96PS6 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GAFA1Q96PS6 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.17□□□□□ -0.14
GAFA1Q96PS6 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GAFA1Q96PS6 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GAFA1Q96PS6 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
GAFA1Q96PS6 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
GAFA1Q96PS6 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
GAFA1Q96PS6 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
GAFA1Q96PS6 AL590627.1-203ENST00000421194 1026 ntBASIC14.17□□□□□ -0.14
GAFA1Q96PS6 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.17□□□□□ -0.14
GAFA1Q96PS6 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
GAFA1Q96PS6 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.17□□□□□ -0.14
GAFA1Q96PS6 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.17□□□□□ -0.14
GAFA1Q96PS6 MIR4751-201ENST00000578027 74 ntBASIC14.17□□□□□ -0.14
GAFA1Q96PS6 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GAFA1Q96PS6 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
GAFA1Q96PS6 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.17□□□□□ -0.14
GAFA1Q96PS6 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
GAFA1Q96PS6 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GAFA1Q96PS6 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms