Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.1■□□□□ 0.49
CALR3Q96L12 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CALR3Q96L12 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CALR3Q96L12 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CALR3Q96L12 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CALR3Q96L12 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.09■□□□□ 0.49
CALR3Q96L12 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CALR3Q96L12 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CALR3Q96L12 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.09■□□□□ 0.49
CALR3Q96L12 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CALR3Q96L12 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CALR3Q96L12 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.09■□□□□ 0.49
CALR3Q96L12 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CALR3Q96L12 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.09■□□□□ 0.49
CALR3Q96L12 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.09■□□□□ 0.49
CALR3Q96L12 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CALR3Q96L12 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CALR3Q96L12 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CALR3Q96L12 AL020989.1-201ENST00000422979 469 ntBASIC18.09■□□□□ 0.49
CALR3Q96L12 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CALR3Q96L12 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CALR3Q96L12 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CALR3Q96L12 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.09■□□□□ 0.49
CALR3Q96L12 NTF6B-201ENST00000591913 560 ntBASIC18.09■□□□□ 0.49
CALR3Q96L12 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CALR3Q96L12 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CALR3Q96L12 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CALR3Q96L12 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CALR3Q96L12 INTS4P1-201ENST00000438455 1935 ntBASIC18.09■□□□□ 0.49
CALR3Q96L12 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.09■□□□□ 0.49
CALR3Q96L12 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CALR3Q96L12 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CALR3Q96L12 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CALR3Q96L12 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC18.09■□□□□ 0.49
CALR3Q96L12 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.09■□□□□ 0.49
CALR3Q96L12 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CALR3Q96L12 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
CALR3Q96L12 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.09■□□□□ 0.49
CALR3Q96L12 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CALR3Q96L12 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CALR3Q96L12 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.08■□□□□ 0.49
CALR3Q96L12 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
CALR3Q96L12 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CALR3Q96L12 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CALR3Q96L12 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CALR3Q96L12 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CALR3Q96L12 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CALR3Q96L12 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
CALR3Q96L12 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CALR3Q96L12 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CALR3Q96L12 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CALR3Q96L12 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CALR3Q96L12 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CALR3Q96L12 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.08■□□□□ 0.48
CALR3Q96L12 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CALR3Q96L12 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CALR3Q96L12 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
CALR3Q96L12 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CALR3Q96L12 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CALR3Q96L12 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.08■□□□□ 0.48
CALR3Q96L12 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CALR3Q96L12 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CALR3Q96L12 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CALR3Q96L12 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CALR3Q96L12 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CALR3Q96L12 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.08■□□□□ 0.48
CALR3Q96L12 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CALR3Q96L12 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CALR3Q96L12 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.07■□□□□ 0.48
CALR3Q96L12 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CALR3Q96L12 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CALR3Q96L12 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.07■□□□□ 0.48
CALR3Q96L12 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CALR3Q96L12 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CALR3Q96L12 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CALR3Q96L12 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CALR3Q96L12 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CALR3Q96L12 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.07■□□□□ 0.48
CALR3Q96L12 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CALR3Q96L12 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.07■□□□□ 0.48
CALR3Q96L12 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CALR3Q96L12 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
CALR3Q96L12 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.07■□□□□ 0.48
CALR3Q96L12 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.07■□□□□ 0.48
CALR3Q96L12 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.07■□□□□ 0.48
CALR3Q96L12 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.07■□□□□ 0.48
CALR3Q96L12 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.07■□□□□ 0.48
CALR3Q96L12 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.07■□□□□ 0.48
CALR3Q96L12 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CALR3Q96L12 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.07■□□□□ 0.48
CALR3Q96L12 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CALR3Q96L12 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CALR3Q96L12 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.07■□□□□ 0.48
CALR3Q96L12 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CALR3Q96L12 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CALR3Q96L12 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.07■□□□□ 0.48
CALR3Q96L12 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CALR3Q96L12 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.07■□□□□ 0.48
CALR3Q96L12 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CALR3Q96L12 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms