Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
ITCHQ96J02 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ITCHQ96J02 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
ITCHQ96J02 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
ITCHQ96J02 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.31■□□□□ 0.2
ITCHQ96J02 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ITCHQ96J02 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.31■□□□□ 0.2
ITCHQ96J02 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ITCHQ96J02 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ITCHQ96J02 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
ITCHQ96J02 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.31■□□□□ 0.2
ITCHQ96J02 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
ITCHQ96J02 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.31■□□□□ 0.2
ITCHQ96J02 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.31■□□□□ 0.2
ITCHQ96J02 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ITCHQ96J02 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.31■□□□□ 0.2
ITCHQ96J02 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.31■□□□□ 0.2
ITCHQ96J02 AC211429.1-201ENST00000415277 523 ntBASIC16.31■□□□□ 0.2
ITCHQ96J02 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.31■□□□□ 0.2
ITCHQ96J02 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.31■□□□□ 0.2
ITCHQ96J02 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.31■□□□□ 0.2
ITCHQ96J02 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.31■□□□□ 0.2
ITCHQ96J02 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
ITCHQ96J02 AP002490.2-201ENST00000524791 560 ntBASIC16.31■□□□□ 0.2
ITCHQ96J02 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ITCHQ96J02 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ITCHQ96J02 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.31■□□□□ 0.2
ITCHQ96J02 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ITCHQ96J02 LINC01023-201ENST00000606054 436 ntBASIC16.31■□□□□ 0.2
ITCHQ96J02 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.31■□□□□ 0.2
ITCHQ96J02 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ITCHQ96J02 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ITCHQ96J02 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
ITCHQ96J02 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ITCHQ96J02 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ITCHQ96J02 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ITCHQ96J02 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ITCHQ96J02 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ITCHQ96J02 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.31■□□□□ 0.2
ITCHQ96J02 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ITCHQ96J02 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ITCHQ96J02 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.31■□□□□ 0.2
ITCHQ96J02 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ITCHQ96J02 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ITCHQ96J02 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ITCHQ96J02 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ITCHQ96J02 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ITCHQ96J02 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ITCHQ96J02 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.3■□□□□ 0.2
ITCHQ96J02 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ITCHQ96J02 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ITCHQ96J02 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.3■□□□□ 0.2
ITCHQ96J02 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ITCHQ96J02 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ITCHQ96J02 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ITCHQ96J02 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
ITCHQ96J02 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.3■□□□□ 0.2
ITCHQ96J02 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.3■□□□□ 0.2
ITCHQ96J02 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.3■□□□□ 0.2
ITCHQ96J02 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
ITCHQ96J02 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ITCHQ96J02 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
ITCHQ96J02 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ITCHQ96J02 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ITCHQ96J02 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ITCHQ96J02 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ITCHQ96J02 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
ITCHQ96J02 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
ITCHQ96J02 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
ITCHQ96J02 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ITCHQ96J02 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ITCHQ96J02 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ITCHQ96J02 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ITCHQ96J02 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.3■□□□□ 0.2
ITCHQ96J02 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ITCHQ96J02 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ITCHQ96J02 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ITCHQ96J02 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.29■□□□□ 0.2
ITCHQ96J02 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
ITCHQ96J02 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ITCHQ96J02 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ITCHQ96J02 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.29■□□□□ 0.2
ITCHQ96J02 AC132938.5-201ENST00000624980 1813 ntBASIC16.29■□□□□ 0.2
ITCHQ96J02 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ITCHQ96J02 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ITCHQ96J02 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.29■□□□□ 0.2
ITCHQ96J02 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.29■□□□□ 0.2
ITCHQ96J02 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ITCHQ96J02 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ITCHQ96J02 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ITCHQ96J02 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.29■□□□□ 0.2
ITCHQ96J02 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.29■□□□□ 0.2
ITCHQ96J02 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.29■□□□□ 0.2
ITCHQ96J02 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ITCHQ96J02 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.29■□□□□ 0.2
ITCHQ96J02 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ITCHQ96J02 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.29■□□□□ 0.2
ITCHQ96J02 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.29■□□□□ 0.2
ITCHQ96J02 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ITCHQ96J02 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms