Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.1■□□□□ 0.33
SHDQ96IW2 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.1■□□□□ 0.33
SHDQ96IW2 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SHDQ96IW2 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.1■□□□□ 0.33
SHDQ96IW2 IGHV3-71-201ENST00000523324 359 ntBASIC17.1■□□□□ 0.33
SHDQ96IW2 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.1■□□□□ 0.33
SHDQ96IW2 AC021097.1-201ENST00000607902 574 ntBASIC17.1■□□□□ 0.33
SHDQ96IW2 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SHDQ96IW2 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHDQ96IW2 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHDQ96IW2 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHDQ96IW2 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
SHDQ96IW2 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHDQ96IW2 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.1■□□□□ 0.33
SHDQ96IW2 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SHDQ96IW2 AP3S2-216ENST00000617003 1561 ntBASIC17.1■□□□□ 0.33
SHDQ96IW2 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.1■□□□□ 0.33
SHDQ96IW2 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SHDQ96IW2 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SHDQ96IW2 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SHDQ96IW2 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHDQ96IW2 AC087289.5-201ENST00000586076 3175 ntBASIC17.1■□□□□ 0.33
SHDQ96IW2 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.09■□□□□ 0.33
SHDQ96IW2 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SHDQ96IW2 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHDQ96IW2 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.09■□□□□ 0.33
SHDQ96IW2 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.09■□□□□ 0.33
SHDQ96IW2 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHDQ96IW2 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHDQ96IW2 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHDQ96IW2 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHDQ96IW2 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SHDQ96IW2 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHDQ96IW2 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.09■□□□□ 0.33
SHDQ96IW2 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.09■□□□□ 0.33
SHDQ96IW2 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.09■□□□□ 0.33
SHDQ96IW2 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHDQ96IW2 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.09■□□□□ 0.33
SHDQ96IW2 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.09■□□□□ 0.33
SHDQ96IW2 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHDQ96IW2 AL138918.1-201ENST00000568306 659 ntBASIC17.09■□□□□ 0.33
SHDQ96IW2 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SHDQ96IW2 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHDQ96IW2 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.09■□□□□ 0.33
SHDQ96IW2 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHDQ96IW2 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SHDQ96IW2 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHDQ96IW2 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.09■□□□□ 0.33
SHDQ96IW2 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHDQ96IW2 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SHDQ96IW2 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SHDQ96IW2 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHDQ96IW2 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.09■□□□□ 0.33
SHDQ96IW2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SHDQ96IW2 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHDQ96IW2 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHDQ96IW2 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHDQ96IW2 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHDQ96IW2 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SHDQ96IW2 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SHDQ96IW2 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SHDQ96IW2 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.08■□□□□ 0.33
SHDQ96IW2 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.08■□□□□ 0.33
SHDQ96IW2 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.08■□□□□ 0.33
SHDQ96IW2 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHDQ96IW2 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.08■□□□□ 0.32
SHDQ96IW2 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHDQ96IW2 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SHDQ96IW2 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SHDQ96IW2 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SHDQ96IW2 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.08■□□□□ 0.32
SHDQ96IW2 AC142381.1-201ENST00000426099 345 ntBASIC17.08■□□□□ 0.32
SHDQ96IW2 AL353705.2-201ENST00000428243 662 ntBASIC17.08■□□□□ 0.32
SHDQ96IW2 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.08■□□□□ 0.32
SHDQ96IW2 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.08■□□□□ 0.32
SHDQ96IW2 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.08■□□□□ 0.32
SHDQ96IW2 KRT18P34-201ENST00000488218 1270 ntBASIC17.08■□□□□ 0.32
SHDQ96IW2 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.08■□□□□ 0.32
SHDQ96IW2 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.08■□□□□ 0.32
SHDQ96IW2 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHDQ96IW2 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.08■□□□□ 0.32
SHDQ96IW2 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.08■□□□□ 0.32
SHDQ96IW2 AC140912.1-201ENST00000577171 1054 ntBASIC17.08■□□□□ 0.32
SHDQ96IW2 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SHDQ96IW2 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.08■□□□□ 0.32
SHDQ96IW2 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.08■□□□□ 0.32
SHDQ96IW2 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SHDQ96IW2 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
SHDQ96IW2 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHDQ96IW2 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHDQ96IW2 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHDQ96IW2 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SHDQ96IW2 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SHDQ96IW2 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.08■□□□□ 0.32
SHDQ96IW2 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SHDQ96IW2 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SHDQ96IW2 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.07■□□□□ 0.32
SHDQ96IW2 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHDQ96IW2 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SHDQ96IW2 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms