Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
PDLIM5Q96HC4 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PDLIM5Q96HC4 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDLIM5Q96HC4 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 TOP3BP1-201ENST00000420768 1380 ntBASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 PTCHD3P3-201ENST00000403073 906 ntBASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 AC006557.2-201ENST00000592985 1240 ntBASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 AC012313.10-201ENST00000623509 926 ntBASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDLIM5Q96HC4 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDLIM5Q96HC4 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDLIM5Q96HC4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDLIM5Q96HC4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDLIM5Q96HC4 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDLIM5Q96HC4 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDLIM5Q96HC4 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.65■□□□□ 0.26
PDLIM5Q96HC4 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDLIM5Q96HC4 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDLIM5Q96HC4 HLA-J-202ENST00000469281 1241 ntBASIC16.65■□□□□ 0.26
PDLIM5Q96HC4 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDLIM5Q96HC4 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.65■□□□□ 0.26
PDLIM5Q96HC4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.65■□□□□ 0.26
PDLIM5Q96HC4 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
PDLIM5Q96HC4 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.65■□□□□ 0.26
PDLIM5Q96HC4 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PDLIM5Q96HC4 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
PDLIM5Q96HC4 AL805961.1-202ENST00000641562 540 ntBASIC16.65■□□□□ 0.26
PDLIM5Q96HC4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.65■□□□□ 0.26
PDLIM5Q96HC4 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDLIM5Q96HC4 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDLIM5Q96HC4 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDLIM5Q96HC4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.65■□□□□ 0.26
PDLIM5Q96HC4 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDLIM5Q96HC4 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PDLIM5Q96HC4 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDLIM5Q96HC4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDLIM5Q96HC4 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDLIM5Q96HC4 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.65■□□□□ 0.26
PDLIM5Q96HC4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.65■□□□□ 0.26
PDLIM5Q96HC4 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.65■□□□□ 0.26
PDLIM5Q96HC4 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.64■□□□□ 0.26
PDLIM5Q96HC4 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PDLIM5Q96HC4 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.64■□□□□ 0.25
PDLIM5Q96HC4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDLIM5Q96HC4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PDLIM5Q96HC4 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
PDLIM5Q96HC4 AC006277.1-201ENST00000624348 1610 ntBASIC16.64■□□□□ 0.25
PDLIM5Q96HC4 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.64■□□□□ 0.25
PDLIM5Q96HC4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDLIM5Q96HC4 KRT18P27-201ENST00000427733 1299 ntBASIC16.64■□□□□ 0.25
PDLIM5Q96HC4 UNC93B7-201ENST00000509439 705 ntBASIC16.64■□□□□ 0.25
PDLIM5Q96HC4 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PDLIM5Q96HC4 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PDLIM5Q96HC4 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.64■□□□□ 0.25
PDLIM5Q96HC4 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PDLIM5Q96HC4 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PDLIM5Q96HC4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms