Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM11Q96F44 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
TRIM11Q96F44 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TRIM11Q96F44 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TRIM11Q96F44 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM11Q96F44 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.06■□□□□ 0.48
TRIM11Q96F44 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
TRIM11Q96F44 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM11Q96F44 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.06■□□□□ 0.48
TRIM11Q96F44 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM11Q96F44 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
TRIM11Q96F44 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM11Q96F44 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.06■□□□□ 0.48
TRIM11Q96F44 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.06■□□□□ 0.48
TRIM11Q96F44 BX005266.1-201ENST00000473402 457 ntBASIC18.06■□□□□ 0.48
TRIM11Q96F44 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM11Q96F44 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.06■□□□□ 0.48
TRIM11Q96F44 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
TRIM11Q96F44 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM11Q96F44 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM11Q96F44 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TRIM11Q96F44 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TRIM11Q96F44 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM11Q96F44 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM11Q96F44 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM11Q96F44 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
TRIM11Q96F44 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM11Q96F44 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM11Q96F44 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM11Q96F44 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.05■□□□□ 0.48
TRIM11Q96F44 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM11Q96F44 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM11Q96F44 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.05■□□□□ 0.48
TRIM11Q96F44 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM11Q96F44 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
TRIM11Q96F44 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM11Q96F44 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
TRIM11Q96F44 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
TRIM11Q96F44 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM11Q96F44 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM11Q96F44 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
TRIM11Q96F44 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM11Q96F44 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM11Q96F44 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM11Q96F44 DUX4L17-201ENST00000557360 1267 ntBASIC18.05■□□□□ 0.48
TRIM11Q96F44 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM11Q96F44 RNF216P1-203ENST00000404404 2427 ntBASIC18.05■□□□□ 0.48
TRIM11Q96F44 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM11Q96F44 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM11Q96F44 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM11Q96F44 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
TRIM11Q96F44 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM11Q96F44 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM11Q96F44 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM11Q96F44 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM11Q96F44 PCDHB17P-201ENST00000539533 2393 ntBASIC18.05■□□□□ 0.48
TRIM11Q96F44 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM11Q96F44 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.05■□□□□ 0.48
TRIM11Q96F44 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TRIM11Q96F44 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM11Q96F44 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
TRIM11Q96F44 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TRIM11Q96F44 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM11Q96F44 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM11Q96F44 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM11Q96F44 PCDHA14-201ENST00000506751 2298 ntBASIC18.05■□□□□ 0.48
TRIM11Q96F44 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.04■□□□□ 0.48
TRIM11Q96F44 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM11Q96F44 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM11Q96F44 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM11Q96F44 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM11Q96F44 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM11Q96F44 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM11Q96F44 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.04■□□□□ 0.48
TRIM11Q96F44 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM11Q96F44 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.04■□□□□ 0.48
TRIM11Q96F44 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM11Q96F44 AL590787.1-201ENST00000568856 1315 ntBASIC18.04■□□□□ 0.48
TRIM11Q96F44 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.04■□□□□ 0.48
TRIM11Q96F44 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM11Q96F44 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
TRIM11Q96F44 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM11Q96F44 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM11Q96F44 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM11Q96F44 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM11Q96F44 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.04■□□□□ 0.48
TRIM11Q96F44 HCG4P8-203ENST00000443049 980 ntBASIC18.04■□□□□ 0.48
TRIM11Q96F44 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.04■□□□□ 0.48
TRIM11Q96F44 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TRIM11Q96F44 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.04■□□□□ 0.48
TRIM11Q96F44 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.04■□□□□ 0.48
TRIM11Q96F44 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.04■□□□□ 0.48
TRIM11Q96F44 AL589182.2-201ENST00000619332 1049 ntBASIC18.04■□□□□ 0.48
TRIM11Q96F44 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TRIM11Q96F44 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.04■□□□□ 0.48
TRIM11Q96F44 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM11Q96F44 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM11Q96F44 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM11Q96F44 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM11Q96F44 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms