Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.46■□□□□ 0.23
VPS33AQ96AX1 AC111152.3-201ENST00000569699 673 ntBASIC16.46■□□□□ 0.23
VPS33AQ96AX1 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.46■□□□□ 0.23
VPS33AQ96AX1 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
VPS33AQ96AX1 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VPS33AQ96AX1 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.46■□□□□ 0.23
VPS33AQ96AX1 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
VPS33AQ96AX1 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VPS33AQ96AX1 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.46■□□□□ 0.23
VPS33AQ96AX1 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.46■□□□□ 0.22
VPS33AQ96AX1 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS33AQ96AX1 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS33AQ96AX1 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
VPS33AQ96AX1 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
VPS33AQ96AX1 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS33AQ96AX1 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.45■□□□□ 0.22
VPS33AQ96AX1 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS33AQ96AX1 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
VPS33AQ96AX1 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS33AQ96AX1 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.45■□□□□ 0.22
VPS33AQ96AX1 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS33AQ96AX1 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.45■□□□□ 0.22
VPS33AQ96AX1 AC122714.2-201ENST00000502787 707 ntBASIC16.45■□□□□ 0.22
VPS33AQ96AX1 GUSBP12-201ENST00000513727 720 ntBASIC16.45■□□□□ 0.22
VPS33AQ96AX1 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.45■□□□□ 0.22
VPS33AQ96AX1 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VPS33AQ96AX1 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VPS33AQ96AX1 STK25P1-201ENST00000585406 838 ntBASIC16.45■□□□□ 0.22
VPS33AQ96AX1 AL138831.2-201ENST00000606564 490 ntBASIC16.45■□□□□ 0.22
VPS33AQ96AX1 AC073912.3-201ENST00000624414 853 ntBASIC16.45■□□□□ 0.22
VPS33AQ96AX1 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.45■□□□□ 0.22
VPS33AQ96AX1 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VPS33AQ96AX1 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.45■□□□□ 0.22
VPS33AQ96AX1 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
VPS33AQ96AX1 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VPS33AQ96AX1 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VPS33AQ96AX1 AL135999.2-201ENST00000622438 1686 ntBASIC16.45■□□□□ 0.22
VPS33AQ96AX1 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.45■□□□□ 0.22
VPS33AQ96AX1 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VPS33AQ96AX1 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS33AQ96AX1 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS33AQ96AX1 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.45■□□□□ 0.22
VPS33AQ96AX1 AC092364.2-201ENST00000596710 2692 ntBASIC16.45■□□□□ 0.22
VPS33AQ96AX1 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
VPS33AQ96AX1 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
VPS33AQ96AX1 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.45■□□□□ 0.22
VPS33AQ96AX1 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.45■□□□□ 0.22
VPS33AQ96AX1 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS33AQ96AX1 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VPS33AQ96AX1 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.45■□□□□ 0.22
VPS33AQ96AX1 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS33AQ96AX1 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS33AQ96AX1 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VPS33AQ96AX1 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS33AQ96AX1 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VPS33AQ96AX1 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS33AQ96AX1 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.44■□□□□ 0.22
VPS33AQ96AX1 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VPS33AQ96AX1 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS33AQ96AX1 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS33AQ96AX1 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.44■□□□□ 0.22
VPS33AQ96AX1 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
VPS33AQ96AX1 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS33AQ96AX1 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS33AQ96AX1 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
VPS33AQ96AX1 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS33AQ96AX1 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
VPS33AQ96AX1 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
VPS33AQ96AX1 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS33AQ96AX1 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VPS33AQ96AX1 AK4P3-201ENST00000418260 669 ntBASIC16.44■□□□□ 0.22
VPS33AQ96AX1 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.44■□□□□ 0.22
VPS33AQ96AX1 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VPS33AQ96AX1 AC005336.2-201ENST00000593183 939 ntBASIC16.44■□□□□ 0.22
VPS33AQ96AX1 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
VPS33AQ96AX1 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.44■□□□□ 0.22
VPS33AQ96AX1 AC026691.1-201ENST00000602502 2017 ntBASIC16.44■□□□□ 0.22
VPS33AQ96AX1 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VPS33AQ96AX1 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS33AQ96AX1 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS33AQ96AX1 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS33AQ96AX1 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VPS33AQ96AX1 PCDHB17P-201ENST00000539533 2393 ntBASIC16.44■□□□□ 0.22
VPS33AQ96AX1 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.44■□□□□ 0.22
VPS33AQ96AX1 FRMD8P1-201ENST00000440433 1524 ntBASIC16.44■□□□□ 0.22
VPS33AQ96AX1 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS33AQ96AX1 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.44■□□□□ 0.22
VPS33AQ96AX1 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VPS33AQ96AX1 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VPS33AQ96AX1 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.43■□□□□ 0.22
VPS33AQ96AX1 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.43■□□□□ 0.22
VPS33AQ96AX1 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS33AQ96AX1 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VPS33AQ96AX1 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS33AQ96AX1 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
VPS33AQ96AX1 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.43■□□□□ 0.22
VPS33AQ96AX1 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS33AQ96AX1 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
VPS33AQ96AX1 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VPS33AQ96AX1 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms