Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
NCLNQ969V3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NCLNQ969V3 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCLNQ969V3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NCLNQ969V3 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
NCLNQ969V3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NCLNQ969V3 AC060834.1-201ENST00000443027 2032 ntBASIC16.62■□□□□ 0.25
NCLNQ969V3 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NCLNQ969V3 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NCLNQ969V3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NCLNQ969V3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCLNQ969V3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.62■□□□□ 0.25
NCLNQ969V3 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCLNQ969V3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCLNQ969V3 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
NCLNQ969V3 TSPY19P-201ENST00000418461 509 ntBASIC16.62■□□□□ 0.25
NCLNQ969V3 TSPY18P-201ENST00000441642 509 ntBASIC16.62■□□□□ 0.25
NCLNQ969V3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.62■□□□□ 0.25
NCLNQ969V3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.62■□□□□ 0.25
NCLNQ969V3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.62■□□□□ 0.25
NCLNQ969V3 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.62■□□□□ 0.25
NCLNQ969V3 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.62■□□□□ 0.25
NCLNQ969V3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.62■□□□□ 0.25
NCLNQ969V3 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NCLNQ969V3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.62■□□□□ 0.25
NCLNQ969V3 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.62■□□□□ 0.25
NCLNQ969V3 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NCLNQ969V3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCLNQ969V3 AC018695.7-201ENST00000624587 2492 ntBASIC16.62■□□□□ 0.25
NCLNQ969V3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NCLNQ969V3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NCLNQ969V3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.62■□□□□ 0.25
NCLNQ969V3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
NCLNQ969V3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.62■□□□□ 0.25
NCLNQ969V3 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.62■□□□□ 0.25
NCLNQ969V3 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.62■□□□□ 0.25
NCLNQ969V3 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCLNQ969V3 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCLNQ969V3 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCLNQ969V3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCLNQ969V3 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
NCLNQ969V3 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCLNQ969V3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NCLNQ969V3 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.61■□□□□ 0.25
NCLNQ969V3 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCLNQ969V3 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
NCLNQ969V3 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCLNQ969V3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.61■□□□□ 0.25
NCLNQ969V3 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
NCLNQ969V3 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.61■□□□□ 0.25
NCLNQ969V3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
NCLNQ969V3 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NCLNQ969V3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
NCLNQ969V3 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCLNQ969V3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NCLNQ969V3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.61■□□□□ 0.25
NCLNQ969V3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.61■□□□□ 0.25
NCLNQ969V3 KRT18P31-201ENST00000506277 1292 ntBASIC16.61■□□□□ 0.25
NCLNQ969V3 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCLNQ969V3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCLNQ969V3 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.61■□□□□ 0.25
NCLNQ969V3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.61■□□□□ 0.25
NCLNQ969V3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.61■□□□□ 0.25
NCLNQ969V3 AC091304.2-201ENST00000564639 760 ntBASIC16.61■□□□□ 0.25
NCLNQ969V3 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.61■□□□□ 0.25
NCLNQ969V3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCLNQ969V3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.61■□□□□ 0.25
NCLNQ969V3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
NCLNQ969V3 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NCLNQ969V3 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCLNQ969V3 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
NCLNQ969V3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NCLNQ969V3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCLNQ969V3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.61■□□□□ 0.25
NCLNQ969V3 PCDHA14-201ENST00000506751 2298 ntBASIC16.61■□□□□ 0.25
NCLNQ969V3 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCLNQ969V3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.6■□□□□ 0.25
NCLNQ969V3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
NCLNQ969V3 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.6■□□□□ 0.25
NCLNQ969V3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
NCLNQ969V3 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCLNQ969V3 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCLNQ969V3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
NCLNQ969V3 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NCLNQ969V3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCLNQ969V3 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCLNQ969V3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
NCLNQ969V3 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
NCLNQ969V3 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.6■□□□□ 0.25
NCLNQ969V3 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
NCLNQ969V3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NCLNQ969V3 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.6■□□□□ 0.25
NCLNQ969V3 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NCLNQ969V3 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCLNQ969V3 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCLNQ969V3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCLNQ969V3 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.6■□□□□ 0.25
NCLNQ969V3 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCLNQ969V3 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
NCLNQ969V3 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms