Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SMARCC1Q92922 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SMARCC1Q92922 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC21.63■■□□□ 1.05
SMARCC1Q92922 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SMARCC1Q92922 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
SMARCC1Q92922 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SMARCC1Q92922 PP14571-201ENST00000404327 934 ntTSL 2 BASIC21.63■■□□□ 1.05
SMARCC1Q92922 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC21.63■■□□□ 1.05
SMARCC1Q92922 STARD13-205ENST00000439831 945 ntTSL 2 BASIC21.63■■□□□ 1.05
SMARCC1Q92922 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC21.63■■□□□ 1.05
SMARCC1Q92922 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.63■■□□□ 1.05
SMARCC1Q92922 KRT17P7-201ENST00000451704 1104 ntBASIC21.63■■□□□ 1.05
SMARCC1Q92922 KRT18P34-201ENST00000488218 1270 ntBASIC21.63■■□□□ 1.05
SMARCC1Q92922 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC21.63■■□□□ 1.05
SMARCC1Q92922 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SMARCC1Q92922 HARS-204ENST00000438307 1789 ntTSL 2 BASIC21.63■■□□□ 1.05
SMARCC1Q92922 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SMARCC1Q92922 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SMARCC1Q92922 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC21.63■■□□□ 1.05
SMARCC1Q92922 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SMARCC1Q92922 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SMARCC1Q92922 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SMARCC1Q92922 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SMARCC1Q92922 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
SMARCC1Q92922 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.62■■□□□ 1.05
SMARCC1Q92922 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMARCC1Q92922 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMARCC1Q92922 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
SMARCC1Q92922 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SMARCC1Q92922 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SMARCC1Q92922 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SMARCC1Q92922 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC21.62■■□□□ 1.05
SMARCC1Q92922 AC009477.1-201ENST00000452936 217 ntBASIC21.62■■□□□ 1.05
SMARCC1Q92922 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC21.62■■□□□ 1.05
SMARCC1Q92922 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC21.62■■□□□ 1.05
SMARCC1Q92922 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC21.62■■□□□ 1.05
SMARCC1Q92922 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC21.62■■□□□ 1.05
SMARCC1Q92922 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SMARCC1Q92922 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC21.62■■□□□ 1.05
SMARCC1Q92922 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMARCC1Q92922 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.62■■□□□ 1.05
SMARCC1Q92922 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SMARCC1Q92922 FOS-208ENST00000555686 1496 ntTSL 2 BASIC21.62■■□□□ 1.05
SMARCC1Q92922 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMARCC1Q92922 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC21.62■■□□□ 1.05
SMARCC1Q92922 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
SMARCC1Q92922 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMARCC1Q92922 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SMARCC1Q92922 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.61■■□□□ 1.05
SMARCC1Q92922 AL035456.1-201ENST00000456064 1369 ntBASIC21.61■■□□□ 1.05
SMARCC1Q92922 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC21.61■■□□□ 1.05
SMARCC1Q92922 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC21.61■■□□□ 1.05
SMARCC1Q92922 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SMARCC1Q92922 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC21.61■■□□□ 1.05
SMARCC1Q92922 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC21.61■■□□□ 1.05
SMARCC1Q92922 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMARCC1Q92922 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
SMARCC1Q92922 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SMARCC1Q92922 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC21.61■■□□□ 1.05
SMARCC1Q92922 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC21.61■■□□□ 1.05
SMARCC1Q92922 CDK2AP2P3-201ENST00000422476 372 ntBASIC21.61■■□□□ 1.05
SMARCC1Q92922 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SMARCC1Q92922 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SMARCC1Q92922 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SMARCC1Q92922 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC21.61■■□□□ 1.05
SMARCC1Q92922 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SMARCC1Q92922 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC21.61■■□□□ 1.05
SMARCC1Q92922 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMARCC1Q92922 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMARCC1Q92922 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC21.61■■□□□ 1.05
SMARCC1Q92922 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMARCC1Q92922 SSH2-210ENST00000582084 560 ntTSL 3 BASIC21.61■■□□□ 1.05
SMARCC1Q92922 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC21.61■■□□□ 1.05
SMARCC1Q92922 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC21.61■■□□□ 1.05
SMARCC1Q92922 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SMARCC1Q92922 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMARCC1Q92922 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMARCC1Q92922 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMARCC1Q92922 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMARCC1Q92922 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SMARCC1Q92922 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
SMARCC1Q92922 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC21.6■■□□□ 1.05
SMARCC1Q92922 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
SMARCC1Q92922 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC21.6■■□□□ 1.05
SMARCC1Q92922 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMARCC1Q92922 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMARCC1Q92922 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMARCC1Q92922 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMARCC1Q92922 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
SMARCC1Q92922 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMARCC1Q92922 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SMARCC1Q92922 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
SMARCC1Q92922 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
SMARCC1Q92922 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SMARCC1Q92922 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC21.6■■□□□ 1.05
SMARCC1Q92922 HLA-V-201ENST00000429037 534 ntBASIC21.6■■□□□ 1.05
SMARCC1Q92922 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC21.6■■□□□ 1.05
SMARCC1Q92922 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC21.6■■□□□ 1.05
SMARCC1Q92922 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC21.6■■□□□ 1.05
SMARCC1Q92922 TP53TG3HP-202ENST00000569755 579 ntBASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms