Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ATG4AQ8WYN0 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATG4AQ8WYN0 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATG4AQ8WYN0 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.73■□□□□ 0.43
ATG4AQ8WYN0 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.73■□□□□ 0.43
ATG4AQ8WYN0 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
ATG4AQ8WYN0 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ATG4AQ8WYN0 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ATG4AQ8WYN0 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATG4AQ8WYN0 PCED1CP-201ENST00000419887 785 ntBASIC17.73■□□□□ 0.43
ATG4AQ8WYN0 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ATG4AQ8WYN0 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.73■□□□□ 0.43
ATG4AQ8WYN0 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.73■□□□□ 0.43
ATG4AQ8WYN0 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.73■□□□□ 0.43
ATG4AQ8WYN0 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.73■□□□□ 0.43
ATG4AQ8WYN0 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
ATG4AQ8WYN0 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
ATG4AQ8WYN0 CICP6-201ENST00000457191 2729 ntBASIC17.73■□□□□ 0.43
ATG4AQ8WYN0 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATG4AQ8WYN0 HLA-A-202ENST00000376806 1854 ntBASIC17.73■□□□□ 0.43
ATG4AQ8WYN0 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATG4AQ8WYN0 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
ATG4AQ8WYN0 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
ATG4AQ8WYN0 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATG4AQ8WYN0 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.73■□□□□ 0.43
ATG4AQ8WYN0 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATG4AQ8WYN0 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.72■□□□□ 0.43
ATG4AQ8WYN0 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.72■□□□□ 0.43
ATG4AQ8WYN0 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
ATG4AQ8WYN0 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATG4AQ8WYN0 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATG4AQ8WYN0 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATG4AQ8WYN0 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
ATG4AQ8WYN0 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
ATG4AQ8WYN0 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATG4AQ8WYN0 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATG4AQ8WYN0 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATG4AQ8WYN0 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.72■□□□□ 0.43
ATG4AQ8WYN0 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATG4AQ8WYN0 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
ATG4AQ8WYN0 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATG4AQ8WYN0 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATG4AQ8WYN0 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.72■□□□□ 0.43
ATG4AQ8WYN0 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATG4AQ8WYN0 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATG4AQ8WYN0 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.72■□□□□ 0.43
ATG4AQ8WYN0 IGHV3-47-201ENST00000425060 335 ntBASIC17.72■□□□□ 0.43
ATG4AQ8WYN0 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATG4AQ8WYN0 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.72■□□□□ 0.43
ATG4AQ8WYN0 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.72■□□□□ 0.43
ATG4AQ8WYN0 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.72■□□□□ 0.43
ATG4AQ8WYN0 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.72■□□□□ 0.43
ATG4AQ8WYN0 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.72■□□□□ 0.43
ATG4AQ8WYN0 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
ATG4AQ8WYN0 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
ATG4AQ8WYN0 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATG4AQ8WYN0 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATG4AQ8WYN0 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATG4AQ8WYN0 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
ATG4AQ8WYN0 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATG4AQ8WYN0 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.72■□□□□ 0.43
ATG4AQ8WYN0 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
ATG4AQ8WYN0 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATG4AQ8WYN0 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
ATG4AQ8WYN0 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.72■□□□□ 0.43
ATG4AQ8WYN0 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATG4AQ8WYN0 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
ATG4AQ8WYN0 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATG4AQ8WYN0 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.72■□□□□ 0.43
ATG4AQ8WYN0 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATG4AQ8WYN0 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.71■□□□□ 0.43
ATG4AQ8WYN0 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ATG4AQ8WYN0 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.71■□□□□ 0.43
ATG4AQ8WYN0 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATG4AQ8WYN0 AC004817.3-201ENST00000602957 2129 ntBASIC17.71■□□□□ 0.43
ATG4AQ8WYN0 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ATG4AQ8WYN0 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
ATG4AQ8WYN0 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATG4AQ8WYN0 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATG4AQ8WYN0 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATG4AQ8WYN0 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.71■□□□□ 0.43
ATG4AQ8WYN0 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
ATG4AQ8WYN0 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ATG4AQ8WYN0 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATG4AQ8WYN0 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.71■□□□□ 0.43
ATG4AQ8WYN0 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
ATG4AQ8WYN0 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ATG4AQ8WYN0 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATG4AQ8WYN0 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.71■□□□□ 0.43
ATG4AQ8WYN0 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.71■□□□□ 0.43
ATG4AQ8WYN0 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.71■□□□□ 0.43
ATG4AQ8WYN0 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.71■□□□□ 0.43
ATG4AQ8WYN0 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.71■□□□□ 0.43
ATG4AQ8WYN0 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.71■□□□□ 0.43
ATG4AQ8WYN0 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ATG4AQ8WYN0 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.71■□□□□ 0.43
ATG4AQ8WYN0 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.71■□□□□ 0.43
ATG4AQ8WYN0 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATG4AQ8WYN0 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
ATG4AQ8WYN0 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms