Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SHKBP1Q8TBC3 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SHKBP1Q8TBC3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.91■□□□□ 0.46
SHKBP1Q8TBC3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHKBP1Q8TBC3 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.91■□□□□ 0.46
SHKBP1Q8TBC3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHKBP1Q8TBC3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SHKBP1Q8TBC3 AC006116.8-202ENST00000587620 1550 ntBASIC17.91■□□□□ 0.46
SHKBP1Q8TBC3 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
SHKBP1Q8TBC3 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SHKBP1Q8TBC3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SHKBP1Q8TBC3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.9■□□□□ 0.46
SHKBP1Q8TBC3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SHKBP1Q8TBC3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SHKBP1Q8TBC3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SHKBP1Q8TBC3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
SHKBP1Q8TBC3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SHKBP1Q8TBC3 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHKBP1Q8TBC3 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.9■□□□□ 0.46
SHKBP1Q8TBC3 AP000344.2-201ENST00000512987 629 ntBASIC17.9■□□□□ 0.46
SHKBP1Q8TBC3 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.9■□□□□ 0.46
SHKBP1Q8TBC3 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SHKBP1Q8TBC3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.9■□□□□ 0.46
SHKBP1Q8TBC3 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SHKBP1Q8TBC3 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHKBP1Q8TBC3 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.9■□□□□ 0.46
SHKBP1Q8TBC3 AL513210.1-201ENST00000629608 234 ntBASIC17.9■□□□□ 0.46
SHKBP1Q8TBC3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SHKBP1Q8TBC3 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHKBP1Q8TBC3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SHKBP1Q8TBC3 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.9■□□□□ 0.46
SHKBP1Q8TBC3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SHKBP1Q8TBC3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHKBP1Q8TBC3 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SHKBP1Q8TBC3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHKBP1Q8TBC3 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHKBP1Q8TBC3 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SHKBP1Q8TBC3 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.9■□□□□ 0.46
SHKBP1Q8TBC3 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHKBP1Q8TBC3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SHKBP1Q8TBC3 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SHKBP1Q8TBC3 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHKBP1Q8TBC3 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.89■□□□□ 0.45
SHKBP1Q8TBC3 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.89■□□□□ 0.45
SHKBP1Q8TBC3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
SHKBP1Q8TBC3 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHKBP1Q8TBC3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SHKBP1Q8TBC3 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHKBP1Q8TBC3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHKBP1Q8TBC3 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHKBP1Q8TBC3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.89■□□□□ 0.45
SHKBP1Q8TBC3 AL645939.2-201ENST00000427340 991 ntBASIC17.89■□□□□ 0.45
SHKBP1Q8TBC3 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SHKBP1Q8TBC3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.89■□□□□ 0.45
SHKBP1Q8TBC3 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.89■□□□□ 0.45
SHKBP1Q8TBC3 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.89■□□□□ 0.45
SHKBP1Q8TBC3 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHKBP1Q8TBC3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.89■□□□□ 0.45
SHKBP1Q8TBC3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHKBP1Q8TBC3 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SHKBP1Q8TBC3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHKBP1Q8TBC3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SHKBP1Q8TBC3 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHKBP1Q8TBC3 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHKBP1Q8TBC3 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHKBP1Q8TBC3 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHKBP1Q8TBC3 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHKBP1Q8TBC3 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SHKBP1Q8TBC3 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SHKBP1Q8TBC3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SHKBP1Q8TBC3 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHKBP1Q8TBC3 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
SHKBP1Q8TBC3 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHKBP1Q8TBC3 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHKBP1Q8TBC3 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHKBP1Q8TBC3 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.88■□□□□ 0.45
SHKBP1Q8TBC3 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.88■□□□□ 0.45
SHKBP1Q8TBC3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SHKBP1Q8TBC3 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHKBP1Q8TBC3 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SHKBP1Q8TBC3 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.88■□□□□ 0.45
SHKBP1Q8TBC3 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SHKBP1Q8TBC3 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
SHKBP1Q8TBC3 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SHKBP1Q8TBC3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SHKBP1Q8TBC3 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SHKBP1Q8TBC3 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SHKBP1Q8TBC3 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHKBP1Q8TBC3 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.88■□□□□ 0.45
SHKBP1Q8TBC3 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SHKBP1Q8TBC3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHKBP1Q8TBC3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SHKBP1Q8TBC3 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SHKBP1Q8TBC3 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.88■□□□□ 0.45
SHKBP1Q8TBC3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.88■□□□□ 0.45
SHKBP1Q8TBC3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.88■□□□□ 0.45
SHKBP1Q8TBC3 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SHKBP1Q8TBC3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.87■□□□□ 0.45
SHKBP1Q8TBC3 LYSMD4-203ENST00000378904 2122 ntBASIC17.87■□□□□ 0.45
SHKBP1Q8TBC3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms