Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC148Q8NFR7 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CCDC148Q8NFR7 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC148Q8NFR7 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC148Q8NFR7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC148Q8NFR7 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.68■□□□□ 0.74
CCDC148Q8NFR7 PAWRP1-201ENST00000451083 565 ntBASIC19.68■□□□□ 0.74
CCDC148Q8NFR7 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.68■□□□□ 0.74
CCDC148Q8NFR7 AC008667.4-201ENST00000607370 168 ntBASIC19.68■□□□□ 0.74
CCDC148Q8NFR7 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC148Q8NFR7 GGTLC5P-201ENST00000617623 998 ntBASIC19.68■□□□□ 0.74
CCDC148Q8NFR7 AC117500.6-201ENST00000624871 588 ntBASIC19.68■□□□□ 0.74
CCDC148Q8NFR7 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.68■□□□□ 0.74
CCDC148Q8NFR7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
CCDC148Q8NFR7 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC148Q8NFR7 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC148Q8NFR7 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CCDC148Q8NFR7 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC148Q8NFR7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC148Q8NFR7 PCDHA12-202ENST00000613593 2588 ntBASIC19.68■□□□□ 0.74
CCDC148Q8NFR7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC148Q8NFR7 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC148Q8NFR7 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC148Q8NFR7 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC148Q8NFR7 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC148Q8NFR7 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CCDC148Q8NFR7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC148Q8NFR7 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC148Q8NFR7 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC148Q8NFR7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC148Q8NFR7 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC148Q8NFR7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC148Q8NFR7 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC148Q8NFR7 AC092053.1-201ENST00000605787 1936 ntBASIC19.67■□□□□ 0.74
CCDC148Q8NFR7 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC148Q8NFR7 AC098831.1-202ENST00000438821 336 ntBASIC19.67■□□□□ 0.74
CCDC148Q8NFR7 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC148Q8NFR7 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC148Q8NFR7 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.67■□□□□ 0.74
CCDC148Q8NFR7 AC116407.3-201ENST00000623905 1129 ntBASIC19.67■□□□□ 0.74
CCDC148Q8NFR7 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC148Q8NFR7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC148Q8NFR7 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC148Q8NFR7 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC148Q8NFR7 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC148Q8NFR7 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC148Q8NFR7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CCDC148Q8NFR7 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC148Q8NFR7 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC148Q8NFR7 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC148Q8NFR7 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CCDC148Q8NFR7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC148Q8NFR7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC148Q8NFR7 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
CCDC148Q8NFR7 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC148Q8NFR7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CCDC148Q8NFR7 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC148Q8NFR7 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.66■□□□□ 0.74
CCDC148Q8NFR7 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC148Q8NFR7 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC148Q8NFR7 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC148Q8NFR7 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC148Q8NFR7 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.66■□□□□ 0.74
CCDC148Q8NFR7 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.66■□□□□ 0.74
CCDC148Q8NFR7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC148Q8NFR7 IGHV3-65-201ENST00000523210 341 ntBASIC19.66■□□□□ 0.74
CCDC148Q8NFR7 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC148Q8NFR7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC148Q8NFR7 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.66■□□□□ 0.74
CCDC148Q8NFR7 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.66■□□□□ 0.74
CCDC148Q8NFR7 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC148Q8NFR7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
CCDC148Q8NFR7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC148Q8NFR7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC148Q8NFR7 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC148Q8NFR7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC148Q8NFR7 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC148Q8NFR7 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CCDC148Q8NFR7 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
CCDC148Q8NFR7 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC148Q8NFR7 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC148Q8NFR7 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CCDC148Q8NFR7 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC148Q8NFR7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC148Q8NFR7 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC148Q8NFR7 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC148Q8NFR7 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC148Q8NFR7 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC148Q8NFR7 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC148Q8NFR7 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC148Q8NFR7 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC148Q8NFR7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC148Q8NFR7 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC148Q8NFR7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC148Q8NFR7 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC148Q8NFR7 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC148Q8NFR7 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC148Q8NFR7 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC148Q8NFR7 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC148Q8NFR7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms