Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.64■□□□□ 0.57
KLHDC9Q8NEP7 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.64■□□□□ 0.57
KLHDC9Q8NEP7 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.64■□□□□ 0.57
KLHDC9Q8NEP7 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.64■□□□□ 0.57
KLHDC9Q8NEP7 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.64■□□□□ 0.57
KLHDC9Q8NEP7 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.64■□□□□ 0.57
KLHDC9Q8NEP7 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
KLHDC9Q8NEP7 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.64■□□□□ 0.57
KLHDC9Q8NEP7 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KLHDC9Q8NEP7 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
KLHDC9Q8NEP7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KLHDC9Q8NEP7 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KLHDC9Q8NEP7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KLHDC9Q8NEP7 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
KLHDC9Q8NEP7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.63■□□□□ 0.57
KLHDC9Q8NEP7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
KLHDC9Q8NEP7 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
KLHDC9Q8NEP7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KLHDC9Q8NEP7 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KLHDC9Q8NEP7 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
KLHDC9Q8NEP7 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KLHDC9Q8NEP7 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KLHDC9Q8NEP7 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.63■□□□□ 0.57
KLHDC9Q8NEP7 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.63■□□□□ 0.57
KLHDC9Q8NEP7 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
KLHDC9Q8NEP7 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KLHDC9Q8NEP7 KRT18P34-201ENST00000488218 1270 ntBASIC18.63■□□□□ 0.57
KLHDC9Q8NEP7 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.63■□□□□ 0.57
KLHDC9Q8NEP7 AC009407.1-201ENST00000568958 598 ntBASIC18.63■□□□□ 0.57
KLHDC9Q8NEP7 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KLHDC9Q8NEP7 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
KLHDC9Q8NEP7 AL359881.2-201ENST00000602973 570 ntBASIC18.63■□□□□ 0.57
KLHDC9Q8NEP7 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.63■□□□□ 0.57
KLHDC9Q8NEP7 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.63■□□□□ 0.57
KLHDC9Q8NEP7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
KLHDC9Q8NEP7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KLHDC9Q8NEP7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KLHDC9Q8NEP7 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KLHDC9Q8NEP7 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.63■□□□□ 0.57
KLHDC9Q8NEP7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KLHDC9Q8NEP7 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KLHDC9Q8NEP7 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
KLHDC9Q8NEP7 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.63■□□□□ 0.57
KLHDC9Q8NEP7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
KLHDC9Q8NEP7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KLHDC9Q8NEP7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KLHDC9Q8NEP7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.62■□□□□ 0.57
KLHDC9Q8NEP7 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KLHDC9Q8NEP7 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KLHDC9Q8NEP7 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KLHDC9Q8NEP7 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.62■□□□□ 0.57
KLHDC9Q8NEP7 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.62■□□□□ 0.57
KLHDC9Q8NEP7 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.62■□□□□ 0.57
KLHDC9Q8NEP7 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.62■□□□□ 0.57
KLHDC9Q8NEP7 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.62■□□□□ 0.57
KLHDC9Q8NEP7 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
KLHDC9Q8NEP7 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KLHDC9Q8NEP7 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.62■□□□□ 0.57
KLHDC9Q8NEP7 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.62■□□□□ 0.57
KLHDC9Q8NEP7 AC016396.2-201ENST00000562575 1417 ntBASIC18.62■□□□□ 0.57
KLHDC9Q8NEP7 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.62■□□□□ 0.57
KLHDC9Q8NEP7 AC093525.9-201ENST00000624961 1746 ntBASIC18.62■□□□□ 0.57
KLHDC9Q8NEP7 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KLHDC9Q8NEP7 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
KLHDC9Q8NEP7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.62■□□□□ 0.57
KLHDC9Q8NEP7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
KLHDC9Q8NEP7 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.61■□□□□ 0.57
KLHDC9Q8NEP7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.61■□□□□ 0.57
KLHDC9Q8NEP7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
KLHDC9Q8NEP7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.61■□□□□ 0.57
KLHDC9Q8NEP7 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KLHDC9Q8NEP7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
KLHDC9Q8NEP7 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KLHDC9Q8NEP7 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
KLHDC9Q8NEP7 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.61■□□□□ 0.57
KLHDC9Q8NEP7 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KLHDC9Q8NEP7 FRMD8P1-201ENST00000440433 1524 ntBASIC18.61■□□□□ 0.57
KLHDC9Q8NEP7 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.61■□□□□ 0.57
KLHDC9Q8NEP7 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
KLHDC9Q8NEP7 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
KLHDC9Q8NEP7 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
KLHDC9Q8NEP7 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
KLHDC9Q8NEP7 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KLHDC9Q8NEP7 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
KLHDC9Q8NEP7 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.61■□□□□ 0.57
KLHDC9Q8NEP7 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.61■□□□□ 0.57
KLHDC9Q8NEP7 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.61■□□□□ 0.57
KLHDC9Q8NEP7 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.61■□□□□ 0.57
KLHDC9Q8NEP7 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
KLHDC9Q8NEP7 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.61■□□□□ 0.57
KLHDC9Q8NEP7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
KLHDC9Q8NEP7 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.61■□□□□ 0.57
KLHDC9Q8NEP7 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
KLHDC9Q8NEP7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KLHDC9Q8NEP7 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KLHDC9Q8NEP7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
KLHDC9Q8NEP7 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KLHDC9Q8NEP7 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.6■□□□□ 0.57
KLHDC9Q8NEP7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KLHDC9Q8NEP7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms