Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 AC004706.3-202ENST00000621574 984 ntBASIC14.97□□□□□ -0.01
CPEB3Q8NE35 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CPEB3Q8NE35 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CPEB3Q8NE35 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CPEB3Q8NE35 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.96□□□□□ -0.01
CPEB3Q8NE35 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CPEB3Q8NE35 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CPEB3Q8NE35 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CPEB3Q8NE35 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.96□□□□□ -0.01
CPEB3Q8NE35 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.96□□□□□ -0.01
CPEB3Q8NE35 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CPEB3Q8NE35 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CPEB3Q8NE35 KRT18P67-201ENST00000432816 1264 ntBASIC14.96□□□□□ -0.01
CPEB3Q8NE35 AF186996.4-201ENST00000467186 377 ntBASIC14.96□□□□□ -0.01
CPEB3Q8NE35 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.96□□□□□ -0.01
CPEB3Q8NE35 OR7E14P-202ENST00000530490 1290 ntBASIC14.96□□□□□ -0.01
CPEB3Q8NE35 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.96□□□□□ -0.01
CPEB3Q8NE35 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.96□□□□□ -0.01
CPEB3Q8NE35 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.96□□□□□ -0.01
CPEB3Q8NE35 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CPEB3Q8NE35 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CPEB3Q8NE35 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.96□□□□□ -0.01
CPEB3Q8NE35 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CPEB3Q8NE35 AL513477.1-201ENST00000602865 2407 ntBASIC14.96□□□□□ -0.01
CPEB3Q8NE35 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CPEB3Q8NE35 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.96□□□□□ -0.01
CPEB3Q8NE35 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.96□□□□□ -0.02
CPEB3Q8NE35 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
CPEB3Q8NE35 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CPEB3Q8NE35 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
CPEB3Q8NE35 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CPEB3Q8NE35 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CPEB3Q8NE35 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CPEB3Q8NE35 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CPEB3Q8NE35 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.96□□□□□ -0.02
CPEB3Q8NE35 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CPEB3Q8NE35 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CPEB3Q8NE35 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC14.95□□□□□ -0.02
CPEB3Q8NE35 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CPEB3Q8NE35 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.95□□□□□ -0.02
CPEB3Q8NE35 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.95□□□□□ -0.02
CPEB3Q8NE35 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.95□□□□□ -0.02
CPEB3Q8NE35 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CPEB3Q8NE35 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CPEB3Q8NE35 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CPEB3Q8NE35 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
CPEB3Q8NE35 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CPEB3Q8NE35 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CPEB3Q8NE35 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.95□□□□□ -0.02
CPEB3Q8NE35 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.95□□□□□ -0.02
CPEB3Q8NE35 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.95□□□□□ -0.02
CPEB3Q8NE35 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.95□□□□□ -0.02
CPEB3Q8NE35 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.95□□□□□ -0.02
CPEB3Q8NE35 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CPEB3Q8NE35 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.95□□□□□ -0.02
CPEB3Q8NE35 LAGE3P1-201ENST00000425356 484 ntBASIC14.95□□□□□ -0.02
CPEB3Q8NE35 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.95□□□□□ -0.02
CPEB3Q8NE35 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.95□□□□□ -0.02
CPEB3Q8NE35 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.95□□□□□ -0.02
CPEB3Q8NE35 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
CPEB3Q8NE35 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.95□□□□□ -0.02
CPEB3Q8NE35 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CPEB3Q8NE35 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.95□□□□□ -0.02
CPEB3Q8NE35 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CPEB3Q8NE35 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CPEB3Q8NE35 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CPEB3Q8NE35 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
CPEB3Q8NE35 AL391005.1-201ENST00000623953 2435 ntBASIC14.95□□□□□ -0.02
CPEB3Q8NE35 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CPEB3Q8NE35 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
CPEB3Q8NE35 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
CPEB3Q8NE35 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CPEB3Q8NE35 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CPEB3Q8NE35 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CPEB3Q8NE35 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CPEB3Q8NE35 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CPEB3Q8NE35 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CPEB3Q8NE35 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CPEB3Q8NE35 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms