Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC26.36■■□□□ 1.81
CFAP43Q8NDM7 AC140912.1-201ENST00000577171 1054 ntBASIC26.36■■□□□ 1.81
CFAP43Q8NDM7 SIGLEC29P-201ENST00000599873 1114 ntBASIC26.36■■□□□ 1.81
CFAP43Q8NDM7 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CFAP43Q8NDM7 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CFAP43Q8NDM7 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CFAP43Q8NDM7 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
CFAP43Q8NDM7 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CFAP43Q8NDM7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
CFAP43Q8NDM7 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CFAP43Q8NDM7 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC26.35■■□□□ 1.81
CFAP43Q8NDM7 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
CFAP43Q8NDM7 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC26.35■■□□□ 1.81
CFAP43Q8NDM7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
CFAP43Q8NDM7 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CFAP43Q8NDM7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CFAP43Q8NDM7 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CFAP43Q8NDM7 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CFAP43Q8NDM7 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC26.35■■□□□ 1.81
CFAP43Q8NDM7 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC26.35■■□□□ 1.81
CFAP43Q8NDM7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CFAP43Q8NDM7 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CFAP43Q8NDM7 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC26.34■■□□□ 1.81
CFAP43Q8NDM7 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC26.34■■□□□ 1.81
CFAP43Q8NDM7 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CFAP43Q8NDM7 AC004233.3-201ENST00000607794 1269 ntBASIC26.34■■□□□ 1.81
CFAP43Q8NDM7 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC26.34■■□□□ 1.81
CFAP43Q8NDM7 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CFAP43Q8NDM7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC26.34■■□□□ 1.81
CFAP43Q8NDM7 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
CFAP43Q8NDM7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CFAP43Q8NDM7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CFAP43Q8NDM7 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
CFAP43Q8NDM7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CFAP43Q8NDM7 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
CFAP43Q8NDM7 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CFAP43Q8NDM7 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC26.34■■□□□ 1.81
CFAP43Q8NDM7 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC26.34■■□□□ 1.81
CFAP43Q8NDM7 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC26.34■■□□□ 1.81
CFAP43Q8NDM7 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC26.34■■□□□ 1.81
CFAP43Q8NDM7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
CFAP43Q8NDM7 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC26.33■■□□□ 1.81
CFAP43Q8NDM7 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CFAP43Q8NDM7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
CFAP43Q8NDM7 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC26.33■■□□□ 1.81
CFAP43Q8NDM7 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CFAP43Q8NDM7 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CFAP43Q8NDM7 KRT8P49-201ENST00000604166 1432 ntBASIC26.33■■□□□ 1.81
CFAP43Q8NDM7 AC009477.1-201ENST00000452936 217 ntBASIC26.33■■□□□ 1.81
CFAP43Q8NDM7 GIMAP3P-201ENST00000495150 836 ntBASIC26.33■■□□□ 1.81
CFAP43Q8NDM7 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC26.33■■□□□ 1.81
CFAP43Q8NDM7 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC26.33■■□□□ 1.81
CFAP43Q8NDM7 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CFAP43Q8NDM7 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CFAP43Q8NDM7 AC008267.7-201ENST00000624570 1194 ntBASIC26.33■■□□□ 1.81
CFAP43Q8NDM7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CFAP43Q8NDM7 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
CFAP43Q8NDM7 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
CFAP43Q8NDM7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.8
CFAP43Q8NDM7 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CFAP43Q8NDM7 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
CFAP43Q8NDM7 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CFAP43Q8NDM7 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CFAP43Q8NDM7 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CFAP43Q8NDM7 ACA64.2-201ENST00000459014 129 ntBASIC26.32■■□□□ 1.8
CFAP43Q8NDM7 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC26.32■■□□□ 1.8
CFAP43Q8NDM7 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC26.32■■□□□ 1.8
CFAP43Q8NDM7 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
CFAP43Q8NDM7 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC26.32■■□□□ 1.8
CFAP43Q8NDM7 TOP3BP1-201ENST00000420768 1380 ntBASIC26.32■■□□□ 1.8
CFAP43Q8NDM7 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CFAP43Q8NDM7 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC26.32■■□□□ 1.8
CFAP43Q8NDM7 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CFAP43Q8NDM7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC26.32■■□□□ 1.8
CFAP43Q8NDM7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC26.32■■□□□ 1.8
CFAP43Q8NDM7 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC26.32■■□□□ 1.8
CFAP43Q8NDM7 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CFAP43Q8NDM7 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CFAP43Q8NDM7 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC26.31■■□□□ 1.8
CFAP43Q8NDM7 CDK4-206ENST00000549606 558 ntTSL 2 BASIC26.31■■□□□ 1.8
CFAP43Q8NDM7 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC26.31■■□□□ 1.8
CFAP43Q8NDM7 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC26.31■■□□□ 1.8
CFAP43Q8NDM7 COQ4-205ENST00000609948 956 ntTSL 2 BASIC26.31■■□□□ 1.8
CFAP43Q8NDM7 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC26.31■■□□□ 1.8
CFAP43Q8NDM7 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
CFAP43Q8NDM7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
CFAP43Q8NDM7 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC26.31■■□□□ 1.8
CFAP43Q8NDM7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
CFAP43Q8NDM7 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CFAP43Q8NDM7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CFAP43Q8NDM7 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC26.31■■□□□ 1.8
CFAP43Q8NDM7 AC131009.4-201ENST00000624048 1740 ntBASIC26.31■■□□□ 1.8
CFAP43Q8NDM7 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
CFAP43Q8NDM7 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC26.31■■□□□ 1.8
CFAP43Q8NDM7 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC26.31■■□□□ 1.8
CFAP43Q8NDM7 PP12613-201ENST00000424958 2230 ntBASIC26.31■■□□□ 1.8
CFAP43Q8NDM7 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CFAP43Q8NDM7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CFAP43Q8NDM7 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
CFAP43Q8NDM7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms