Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN22Q8N7P3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.6■□□□□ 0.09
CLDN22Q8N7P3 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN22Q8N7P3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.6■□□□□ 0.09
CLDN22Q8N7P3 AC246785.2-201ENST00000432512 513 ntBASIC15.6■□□□□ 0.09
CLDN22Q8N7P3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.6■□□□□ 0.09
CLDN22Q8N7P3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.6■□□□□ 0.09
CLDN22Q8N7P3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.6■□□□□ 0.09
CLDN22Q8N7P3 STK19B-204ENST00000512515 211 ntBASIC15.6■□□□□ 0.09
CLDN22Q8N7P3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN22Q8N7P3 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN22Q8N7P3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN22Q8N7P3 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN22Q8N7P3 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN22Q8N7P3 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN22Q8N7P3 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.6■□□□□ 0.09
CLDN22Q8N7P3 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN22Q8N7P3 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN22Q8N7P3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN22Q8N7P3 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
CLDN22Q8N7P3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN22Q8N7P3 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
CLDN22Q8N7P3 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN22Q8N7P3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
CLDN22Q8N7P3 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN22Q8N7P3 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.59■□□□□ 0.09
CLDN22Q8N7P3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN22Q8N7P3 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN22Q8N7P3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN22Q8N7P3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN22Q8N7P3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN22Q8N7P3 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
CLDN22Q8N7P3 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.59■□□□□ 0.09
CLDN22Q8N7P3 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.59■□□□□ 0.09
CLDN22Q8N7P3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN22Q8N7P3 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CLDN22Q8N7P3 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.59■□□□□ 0.09
CLDN22Q8N7P3 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN22Q8N7P3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.59■□□□□ 0.09
CLDN22Q8N7P3 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN22Q8N7P3 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
CLDN22Q8N7P3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.59■□□□□ 0.09
CLDN22Q8N7P3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN22Q8N7P3 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN22Q8N7P3 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CLDN22Q8N7P3 AP002383.4-201ENST00000442518 975 ntBASIC15.59■□□□□ 0.09
CLDN22Q8N7P3 TSSC2-201ENST00000450217 709 ntBASIC15.59■□□□□ 0.09
CLDN22Q8N7P3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.59■□□□□ 0.09
CLDN22Q8N7P3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.59■□□□□ 0.09
CLDN22Q8N7P3 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN22Q8N7P3 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CLDN22Q8N7P3 AL590326.2-201ENST00000625139 305 ntBASIC15.59■□□□□ 0.09
CLDN22Q8N7P3 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.59■□□□□ 0.09
CLDN22Q8N7P3 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.59■□□□□ 0.09
CLDN22Q8N7P3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN22Q8N7P3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN22Q8N7P3 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN22Q8N7P3 KRT18P1-202ENST00000452408 1331 ntBASIC15.59■□□□□ 0.09
CLDN22Q8N7P3 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.59■□□□□ 0.09
CLDN22Q8N7P3 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN22Q8N7P3 IER3-202ENST00000376377 1350 ntBASIC15.59■□□□□ 0.09
CLDN22Q8N7P3 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN22Q8N7P3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.59■□□□□ 0.09
CLDN22Q8N7P3 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN22Q8N7P3 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN22Q8N7P3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.58■□□□□ 0.09
CLDN22Q8N7P3 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.58■□□□□ 0.09
CLDN22Q8N7P3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CLDN22Q8N7P3 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.09
CLDN22Q8N7P3 AL513523.2-202ENST00000427283 2040 ntBASIC15.58■□□□□ 0.09
CLDN22Q8N7P3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CLDN22Q8N7P3 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CLDN22Q8N7P3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.09
CLDN22Q8N7P3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.09
CLDN22Q8N7P3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CLDN22Q8N7P3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CLDN22Q8N7P3 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.09
CLDN22Q8N7P3 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN22Q8N7P3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN22Q8N7P3 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN22Q8N7P3 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN22Q8N7P3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.58■□□□□ 0.08
CLDN22Q8N7P3 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CLDN22Q8N7P3 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN22Q8N7P3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.58■□□□□ 0.08
CLDN22Q8N7P3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.58■□□□□ 0.08
CLDN22Q8N7P3 AC009533.2-201ENST00000543664 586 ntBASIC15.58■□□□□ 0.08
CLDN22Q8N7P3 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN22Q8N7P3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
CLDN22Q8N7P3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.58■□□□□ 0.08
CLDN22Q8N7P3 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
CLDN22Q8N7P3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN22Q8N7P3 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CLDN22Q8N7P3 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN22Q8N7P3 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN22Q8N7P3 TUBB8P12-201ENST00000308911 1335 ntBASIC15.58■□□□□ 0.08
CLDN22Q8N7P3 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN22Q8N7P3 TUBB7P-202ENST00000428444 1305 ntBASIC15.58■□□□□ 0.08
CLDN22Q8N7P3 TUBB8P7-204ENST00000567960 1332 ntBASIC15.58■□□□□ 0.08
CLDN22Q8N7P3 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms