Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.6■□□□□ 0.41
PAF1Q8N7H5 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.6■□□□□ 0.41
PAF1Q8N7H5 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.6■□□□□ 0.41
PAF1Q8N7H5 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PAF1Q8N7H5 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.6■□□□□ 0.41
PAF1Q8N7H5 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PAF1Q8N7H5 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PAF1Q8N7H5 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.6■□□□□ 0.41
PAF1Q8N7H5 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PAF1Q8N7H5 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.6■□□□□ 0.41
PAF1Q8N7H5 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PAF1Q8N7H5 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PAF1Q8N7H5 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PAF1Q8N7H5 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PAF1Q8N7H5 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PAF1Q8N7H5 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PAF1Q8N7H5 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.6■□□□□ 0.41
PAF1Q8N7H5 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.6■□□□□ 0.41
PAF1Q8N7H5 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PAF1Q8N7H5 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PAF1Q8N7H5 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PAF1Q8N7H5 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PAF1Q8N7H5 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PAF1Q8N7H5 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PAF1Q8N7H5 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
PAF1Q8N7H5 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC17.59■□□□□ 0.41
PAF1Q8N7H5 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PAF1Q8N7H5 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PAF1Q8N7H5 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PAF1Q8N7H5 PCDHB18P-201ENST00000524813 2368 ntBASIC17.59■□□□□ 0.41
PAF1Q8N7H5 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PAF1Q8N7H5 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PAF1Q8N7H5 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.59■□□□□ 0.41
PAF1Q8N7H5 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PAF1Q8N7H5 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.59■□□□□ 0.41
PAF1Q8N7H5 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.59■□□□□ 0.41
PAF1Q8N7H5 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PAF1Q8N7H5 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.59■□□□□ 0.41
PAF1Q8N7H5 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PAF1Q8N7H5 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PAF1Q8N7H5 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PAF1Q8N7H5 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PAF1Q8N7H5 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
PAF1Q8N7H5 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
PAF1Q8N7H5 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.59■□□□□ 0.41
PAF1Q8N7H5 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.59■□□□□ 0.41
PAF1Q8N7H5 AP002469.2-201ENST00000531724 424 ntBASIC17.59■□□□□ 0.41
PAF1Q8N7H5 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.59■□□□□ 0.41
PAF1Q8N7H5 AL662844.1-201ENST00000546340 181 ntBASIC17.59■□□□□ 0.41
PAF1Q8N7H5 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.59■□□□□ 0.41
PAF1Q8N7H5 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.59■□□□□ 0.41
PAF1Q8N7H5 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.59■□□□□ 0.41
PAF1Q8N7H5 AL773604.1-201ENST00000617417 272 ntBASIC17.59■□□□□ 0.41
PAF1Q8N7H5 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PAF1Q8N7H5 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PAF1Q8N7H5 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
PAF1Q8N7H5 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PAF1Q8N7H5 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PAF1Q8N7H5 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
PAF1Q8N7H5 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PAF1Q8N7H5 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
PAF1Q8N7H5 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.58■□□□□ 0.41
PAF1Q8N7H5 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
PAF1Q8N7H5 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PAF1Q8N7H5 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PAF1Q8N7H5 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PAF1Q8N7H5 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PAF1Q8N7H5 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PAF1Q8N7H5 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PAF1Q8N7H5 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
PAF1Q8N7H5 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PAF1Q8N7H5 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
PAF1Q8N7H5 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PAF1Q8N7H5 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.58■□□□□ 0.4
PAF1Q8N7H5 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
PAF1Q8N7H5 LYSMD4-203ENST00000378904 2122 ntBASIC17.58■□□□□ 0.4
PAF1Q8N7H5 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.58■□□□□ 0.4
PAF1Q8N7H5 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
PAF1Q8N7H5 OR7E14P-202ENST00000530490 1290 ntBASIC17.58■□□□□ 0.4
PAF1Q8N7H5 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.58■□□□□ 0.4
PAF1Q8N7H5 AC021087.4-201ENST00000563761 564 ntBASIC17.58■□□□□ 0.4
PAF1Q8N7H5 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.58■□□□□ 0.4
PAF1Q8N7H5 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.58■□□□□ 0.4
PAF1Q8N7H5 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
PAF1Q8N7H5 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PAF1Q8N7H5 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PAF1Q8N7H5 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PAF1Q8N7H5 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PAF1Q8N7H5 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PAF1Q8N7H5 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
PAF1Q8N7H5 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PAF1Q8N7H5 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PAF1Q8N7H5 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PAF1Q8N7H5 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.57■□□□□ 0.4
PAF1Q8N7H5 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PAF1Q8N7H5 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PAF1Q8N7H5 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PAF1Q8N7H5 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
PAF1Q8N7H5 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.57■□□□□ 0.4
PAF1Q8N7H5 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms