Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDH20Q8N6Y1 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH20Q8N6Y1 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH20Q8N6Y1 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH20Q8N6Y1 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH20Q8N6Y1 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDH20Q8N6Y1 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH20Q8N6Y1 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH20Q8N6Y1 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
PCDH20Q8N6Y1 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PCDH20Q8N6Y1 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH20Q8N6Y1 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH20Q8N6Y1 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDH20Q8N6Y1 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH20Q8N6Y1 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH20Q8N6Y1 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
PCDH20Q8N6Y1 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH20Q8N6Y1 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
PCDH20Q8N6Y1 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PCDH20Q8N6Y1 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDH20Q8N6Y1 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDH20Q8N6Y1 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDH20Q8N6Y1 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDH20Q8N6Y1 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDH20Q8N6Y1 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH20Q8N6Y1 TERC-201ENST00000602385 541 ntBASIC17.46■□□□□ 0.39
PCDH20Q8N6Y1 FAM197Y3-203ENST00000618346 717 ntBASIC17.46■□□□□ 0.39
PCDH20Q8N6Y1 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
PCDH20Q8N6Y1 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDH20Q8N6Y1 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
PCDH20Q8N6Y1 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH20Q8N6Y1 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
PCDH20Q8N6Y1 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
PCDH20Q8N6Y1 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
PCDH20Q8N6Y1 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH20Q8N6Y1 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH20Q8N6Y1 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDH20Q8N6Y1 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDH20Q8N6Y1 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.46■□□□□ 0.38
PCDH20Q8N6Y1 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
PCDH20Q8N6Y1 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PCDH20Q8N6Y1 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PCDH20Q8N6Y1 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.46■□□□□ 0.38
PCDH20Q8N6Y1 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH20Q8N6Y1 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH20Q8N6Y1 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PCDH20Q8N6Y1 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDH20Q8N6Y1 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH20Q8N6Y1 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH20Q8N6Y1 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDH20Q8N6Y1 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH20Q8N6Y1 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.45■□□□□ 0.38
PCDH20Q8N6Y1 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH20Q8N6Y1 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDH20Q8N6Y1 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDH20Q8N6Y1 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH20Q8N6Y1 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH20Q8N6Y1 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH20Q8N6Y1 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH20Q8N6Y1 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDH20Q8N6Y1 MED15P5-201ENST00000423150 992 ntBASIC17.45■□□□□ 0.38
PCDH20Q8N6Y1 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH20Q8N6Y1 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH20Q8N6Y1 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDH20Q8N6Y1 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH20Q8N6Y1 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PCDH20Q8N6Y1 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH20Q8N6Y1 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH20Q8N6Y1 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH20Q8N6Y1 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDH20Q8N6Y1 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH20Q8N6Y1 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH20Q8N6Y1 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH20Q8N6Y1 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDH20Q8N6Y1 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 AL023806.1-201ENST00000603994 1649 ntBASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 PRSS29P-201ENST00000440800 595 ntBASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms