Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT78Q8N1N4 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT78Q8N1N4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.51■□□□□ 0.23
KRT78Q8N1N4 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.51■□□□□ 0.23
KRT78Q8N1N4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
KRT78Q8N1N4 AC092053.1-201ENST00000605787 1936 ntBASIC16.51■□□□□ 0.23
KRT78Q8N1N4 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KRT78Q8N1N4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT78Q8N1N4 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.5■□□□□ 0.23
KRT78Q8N1N4 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT78Q8N1N4 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT78Q8N1N4 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT78Q8N1N4 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
KRT78Q8N1N4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT78Q8N1N4 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT78Q8N1N4 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT78Q8N1N4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.5■□□□□ 0.23
KRT78Q8N1N4 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.5■□□□□ 0.23
KRT78Q8N1N4 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT78Q8N1N4 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KRT78Q8N1N4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.5■□□□□ 0.23
KRT78Q8N1N4 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.5■□□□□ 0.23
KRT78Q8N1N4 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KRT78Q8N1N4 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.5■□□□□ 0.23
KRT78Q8N1N4 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.5■□□□□ 0.23
KRT78Q8N1N4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.5■□□□□ 0.23
KRT78Q8N1N4 UNC93B7-201ENST00000509439 705 ntBASIC16.5■□□□□ 0.23
KRT78Q8N1N4 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KRT78Q8N1N4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.5■□□□□ 0.23
KRT78Q8N1N4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KRT78Q8N1N4 AL139424.1-201ENST00000607572 797 ntBASIC16.5■□□□□ 0.23
KRT78Q8N1N4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.5■□□□□ 0.23
KRT78Q8N1N4 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT78Q8N1N4 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
KRT78Q8N1N4 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT78Q8N1N4 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KRT78Q8N1N4 AC080080.1-201ENST00000625121 2420 ntBASIC16.5■□□□□ 0.23
KRT78Q8N1N4 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.5■□□□□ 0.23
KRT78Q8N1N4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT78Q8N1N4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
KRT78Q8N1N4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KRT78Q8N1N4 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT78Q8N1N4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
KRT78Q8N1N4 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT78Q8N1N4 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
KRT78Q8N1N4 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT78Q8N1N4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.5■□□□□ 0.23
KRT78Q8N1N4 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT78Q8N1N4 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT78Q8N1N4 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT78Q8N1N4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KRT78Q8N1N4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.49■□□□□ 0.23
KRT78Q8N1N4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
KRT78Q8N1N4 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
KRT78Q8N1N4 FLJ16779-201ENST00000612722 7638 ntBASIC16.49■□□□□ 0.23
KRT78Q8N1N4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT78Q8N1N4 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.49■□□□□ 0.23
KRT78Q8N1N4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT78Q8N1N4 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
KRT78Q8N1N4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT78Q8N1N4 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
KRT78Q8N1N4 AC073648.2-201ENST00000510116 352 ntBASIC16.49■□□□□ 0.23
KRT78Q8N1N4 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.49■□□□□ 0.23
KRT78Q8N1N4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KRT78Q8N1N4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
KRT78Q8N1N4 AL691432.3-201ENST00000621860 400 ntBASIC16.49■□□□□ 0.23
KRT78Q8N1N4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT78Q8N1N4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KRT78Q8N1N4 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
KRT78Q8N1N4 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KRT78Q8N1N4 FRMD8P1-201ENST00000440433 1524 ntBASIC16.49■□□□□ 0.23
KRT78Q8N1N4 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
KRT78Q8N1N4 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
KRT78Q8N1N4 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT78Q8N1N4 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT78Q8N1N4 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.49■□□□□ 0.23
KRT78Q8N1N4 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT78Q8N1N4 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT78Q8N1N4 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT78Q8N1N4 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.48■□□□□ 0.23
KRT78Q8N1N4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT78Q8N1N4 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT78Q8N1N4 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT78Q8N1N4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT78Q8N1N4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT78Q8N1N4 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT78Q8N1N4 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT78Q8N1N4 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT78Q8N1N4 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KRT78Q8N1N4 AC004870.1-201ENST00000315132 882 ntBASIC16.48■□□□□ 0.23
KRT78Q8N1N4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.48■□□□□ 0.23
KRT78Q8N1N4 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.48■□□□□ 0.23
KRT78Q8N1N4 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KRT78Q8N1N4 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.48■□□□□ 0.23
KRT78Q8N1N4 AL450487.1-201ENST00000426799 995 ntBASIC16.48■□□□□ 0.23
KRT78Q8N1N4 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
KRT78Q8N1N4 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.48■□□□□ 0.23
KRT78Q8N1N4 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
KRT78Q8N1N4 AC021087.4-201ENST00000563761 564 ntBASIC16.48■□□□□ 0.23
KRT78Q8N1N4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms