Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TMEFF1Q8IYR6 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.92■□□□□ 0.3
TMEFF1Q8IYR6 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.92■□□□□ 0.3
TMEFF1Q8IYR6 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEFF1Q8IYR6 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
TMEFF1Q8IYR6 AC008677.1-201ENST00000519230 1561 ntBASIC16.92■□□□□ 0.3
TMEFF1Q8IYR6 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TMEFF1Q8IYR6 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TMEFF1Q8IYR6 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEFF1Q8IYR6 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TMEFF1Q8IYR6 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.92■□□□□ 0.3
TMEFF1Q8IYR6 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.92■□□□□ 0.3
TMEFF1Q8IYR6 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEFF1Q8IYR6 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TMEFF1Q8IYR6 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TMEFF1Q8IYR6 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEFF1Q8IYR6 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEFF1Q8IYR6 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.91■□□□□ 0.3
TMEFF1Q8IYR6 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.91■□□□□ 0.3
TMEFF1Q8IYR6 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEFF1Q8IYR6 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEFF1Q8IYR6 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEFF1Q8IYR6 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.91■□□□□ 0.3
TMEFF1Q8IYR6 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.91■□□□□ 0.3
TMEFF1Q8IYR6 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEFF1Q8IYR6 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMEFF1Q8IYR6 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TMEFF1Q8IYR6 NOC2LP1-202ENST00000452600 2235 ntBASIC16.91■□□□□ 0.3
TMEFF1Q8IYR6 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEFF1Q8IYR6 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMEFF1Q8IYR6 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEFF1Q8IYR6 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.91■□□□□ 0.3
TMEFF1Q8IYR6 MIR661-201ENST00000384842 89 ntBASIC16.91■□□□□ 0.3
TMEFF1Q8IYR6 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.91■□□□□ 0.3
TMEFF1Q8IYR6 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.91■□□□□ 0.3
TMEFF1Q8IYR6 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.91■□□□□ 0.3
TMEFF1Q8IYR6 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.91■□□□□ 0.3
TMEFF1Q8IYR6 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.91■□□□□ 0.3
TMEFF1Q8IYR6 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.91■□□□□ 0.3
TMEFF1Q8IYR6 AC087641.1-201ENST00000557561 1021 ntBASIC16.91■□□□□ 0.3
TMEFF1Q8IYR6 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.91■□□□□ 0.3
TMEFF1Q8IYR6 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMEFF1Q8IYR6 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.91■□□□□ 0.3
TMEFF1Q8IYR6 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEFF1Q8IYR6 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.91■□□□□ 0.3
TMEFF1Q8IYR6 AL390754.1-201ENST00000619088 582 ntBASIC16.91■□□□□ 0.3
TMEFF1Q8IYR6 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEFF1Q8IYR6 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEFF1Q8IYR6 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TMEFF1Q8IYR6 AC012317.2-201ENST00000623305 2251 ntBASIC16.91■□□□□ 0.3
TMEFF1Q8IYR6 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.91■□□□□ 0.3
TMEFF1Q8IYR6 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.91■□□□□ 0.3
TMEFF1Q8IYR6 AC063926.2-201ENST00000623766 1308 ntBASIC16.91■□□□□ 0.3
TMEFF1Q8IYR6 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEFF1Q8IYR6 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEFF1Q8IYR6 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMEFF1Q8IYR6 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEFF1Q8IYR6 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEFF1Q8IYR6 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.9■□□□□ 0.3
TMEFF1Q8IYR6 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEFF1Q8IYR6 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TMEFF1Q8IYR6 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEFF1Q8IYR6 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TMEFF1Q8IYR6 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEFF1Q8IYR6 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.9■□□□□ 0.3
TMEFF1Q8IYR6 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.9■□□□□ 0.3
TMEFF1Q8IYR6 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.9■□□□□ 0.3
TMEFF1Q8IYR6 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.9■□□□□ 0.3
TMEFF1Q8IYR6 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.9■□□□□ 0.3
TMEFF1Q8IYR6 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.9■□□□□ 0.3
TMEFF1Q8IYR6 SLC25A39P2-201ENST00000537614 270 ntBASIC16.9■□□□□ 0.3
TMEFF1Q8IYR6 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.9■□□□□ 0.3
TMEFF1Q8IYR6 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.9■□□□□ 0.3
TMEFF1Q8IYR6 AC026150.2-201ENST00000564693 1156 ntBASIC16.9■□□□□ 0.3
TMEFF1Q8IYR6 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.9■□□□□ 0.3
TMEFF1Q8IYR6 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.9■□□□□ 0.3
TMEFF1Q8IYR6 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TMEFF1Q8IYR6 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEFF1Q8IYR6 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEFF1Q8IYR6 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
TMEFF1Q8IYR6 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TMEFF1Q8IYR6 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TMEFF1Q8IYR6 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TMEFF1Q8IYR6 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TMEFF1Q8IYR6 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TMEFF1Q8IYR6 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEFF1Q8IYR6 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TMEFF1Q8IYR6 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.89■□□□□ 0.3
TMEFF1Q8IYR6 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
TMEFF1Q8IYR6 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.89■□□□□ 0.3
TMEFF1Q8IYR6 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TMEFF1Q8IYR6 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEFF1Q8IYR6 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
TMEFF1Q8IYR6 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEFF1Q8IYR6 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEFF1Q8IYR6 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEFF1Q8IYR6 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEFF1Q8IYR6 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEFF1Q8IYR6 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.89■□□□□ 0.29
TMEFF1Q8IYR6 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms