Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.38■□□□□ 0.21
RAB43Q86YS6 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.38■□□□□ 0.21
RAB43Q86YS6 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RAB43Q86YS6 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RAB43Q86YS6 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.37■□□□□ 0.21
RAB43Q86YS6 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.37■□□□□ 0.21
RAB43Q86YS6 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAB43Q86YS6 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB43Q86YS6 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB43Q86YS6 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB43Q86YS6 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB43Q86YS6 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB43Q86YS6 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAB43Q86YS6 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.37■□□□□ 0.21
RAB43Q86YS6 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB43Q86YS6 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB43Q86YS6 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB43Q86YS6 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.37■□□□□ 0.21
RAB43Q86YS6 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB43Q86YS6 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
RAB43Q86YS6 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.37■□□□□ 0.21
RAB43Q86YS6 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.37■□□□□ 0.21
RAB43Q86YS6 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.37■□□□□ 0.21
RAB43Q86YS6 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.37■□□□□ 0.21
RAB43Q86YS6 STK19B-204ENST00000512515 211 ntBASIC16.37■□□□□ 0.21
RAB43Q86YS6 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAB43Q86YS6 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB43Q86YS6 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB43Q86YS6 AC132938.5-201ENST00000624980 1813 ntBASIC16.37■□□□□ 0.21
RAB43Q86YS6 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RAB43Q86YS6 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.37■□□□□ 0.21
RAB43Q86YS6 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB43Q86YS6 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAB43Q86YS6 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB43Q86YS6 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RAB43Q86YS6 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
RAB43Q86YS6 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB43Q86YS6 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.37■□□□□ 0.21
RAB43Q86YS6 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB43Q86YS6 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.36■□□□□ 0.21
RAB43Q86YS6 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAB43Q86YS6 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB43Q86YS6 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
RAB43Q86YS6 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
RAB43Q86YS6 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAB43Q86YS6 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAB43Q86YS6 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.36■□□□□ 0.21
RAB43Q86YS6 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB43Q86YS6 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
RAB43Q86YS6 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
RAB43Q86YS6 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
RAB43Q86YS6 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB43Q86YS6 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB43Q86YS6 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
RAB43Q86YS6 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
RAB43Q86YS6 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAB43Q86YS6 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB43Q86YS6 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB43Q86YS6 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.36■□□□□ 0.21
RAB43Q86YS6 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAB43Q86YS6 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.36■□□□□ 0.21
RAB43Q86YS6 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.36■□□□□ 0.21
RAB43Q86YS6 UPF3AP3-201ENST00000420996 769 ntBASIC16.36■□□□□ 0.21
RAB43Q86YS6 AC005104.2-201ENST00000427818 678 ntBASIC16.36■□□□□ 0.21
RAB43Q86YS6 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAB43Q86YS6 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.36■□□□□ 0.21
RAB43Q86YS6 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.36■□□□□ 0.21
RAB43Q86YS6 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.36■□□□□ 0.21
RAB43Q86YS6 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.36■□□□□ 0.21
RAB43Q86YS6 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.36■□□□□ 0.21
RAB43Q86YS6 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB43Q86YS6 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.36■□□□□ 0.21
RAB43Q86YS6 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.36■□□□□ 0.21
RAB43Q86YS6 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.36■□□□□ 0.21
RAB43Q86YS6 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.36■□□□□ 0.21
RAB43Q86YS6 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.36■□□□□ 0.21
RAB43Q86YS6 AC019129.2-201ENST00000609837 1235 ntBASIC16.36■□□□□ 0.21
RAB43Q86YS6 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAB43Q86YS6 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB43Q86YS6 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
RAB43Q86YS6 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
RAB43Q86YS6 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB43Q86YS6 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB43Q86YS6 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB43Q86YS6 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAB43Q86YS6 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB43Q86YS6 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB43Q86YS6 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB43Q86YS6 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.36■□□□□ 0.21
RAB43Q86YS6 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RAB43Q86YS6 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB43Q86YS6 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB43Q86YS6 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB43Q86YS6 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RAB43Q86YS6 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB43Q86YS6 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAB43Q86YS6 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAB43Q86YS6 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RAB43Q86YS6 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.35■□□□□ 0.21
RAB43Q86YS6 AL162727.3-201ENST00000635661 2787 ntBASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms