Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.39■□□□□ 0.7
PPP4R3AQ6IN85 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PPP4R3AQ6IN85 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PPP4R3AQ6IN85 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PPP4R3AQ6IN85 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PPP4R3AQ6IN85 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PPP4R3AQ6IN85 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PPP4R3AQ6IN85 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PPP4R3AQ6IN85 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PPP4R3AQ6IN85 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PPP4R3AQ6IN85 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PPP4R3AQ6IN85 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.39■□□□□ 0.69
PPP4R3AQ6IN85 UNC93B6-202ENST00000528242 690 ntBASIC19.39■□□□□ 0.69
PPP4R3AQ6IN85 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PPP4R3AQ6IN85 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.39■□□□□ 0.69
PPP4R3AQ6IN85 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.39■□□□□ 0.69
PPP4R3AQ6IN85 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
PPP4R3AQ6IN85 IL9RP2-201ENST00000423948 1312 ntBASIC19.39■□□□□ 0.69
PPP4R3AQ6IN85 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PPP4R3AQ6IN85 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PPP4R3AQ6IN85 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PPP4R3AQ6IN85 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PPP4R3AQ6IN85 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PPP4R3AQ6IN85 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.39■□□□□ 0.69
PPP4R3AQ6IN85 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.39■□□□□ 0.69
PPP4R3AQ6IN85 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PPP4R3AQ6IN85 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
PPP4R3AQ6IN85 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
PPP4R3AQ6IN85 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PPP4R3AQ6IN85 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PPP4R3AQ6IN85 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PPP4R3AQ6IN85 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PPP4R3AQ6IN85 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PPP4R3AQ6IN85 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
PPP4R3AQ6IN85 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PPP4R3AQ6IN85 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PPP4R3AQ6IN85 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PPP4R3AQ6IN85 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PPP4R3AQ6IN85 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PPP4R3AQ6IN85 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.38■□□□□ 0.69
PPP4R3AQ6IN85 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.38■□□□□ 0.69
PPP4R3AQ6IN85 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PPP4R3AQ6IN85 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PPP4R3AQ6IN85 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.38■□□□□ 0.69
PPP4R3AQ6IN85 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.38■□□□□ 0.69
PPP4R3AQ6IN85 AC009947.1-201ENST00000444350 727 ntBASIC19.38■□□□□ 0.69
PPP4R3AQ6IN85 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.38■□□□□ 0.69
PPP4R3AQ6IN85 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PPP4R3AQ6IN85 RNA5SP415-201ENST00000517246 115 ntBASIC19.38■□□□□ 0.69
PPP4R3AQ6IN85 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PPP4R3AQ6IN85 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.38■□□□□ 0.69
PPP4R3AQ6IN85 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.38■□□□□ 0.69
PPP4R3AQ6IN85 AC145285.3-201ENST00000564603 959 ntBASIC19.38■□□□□ 0.69
PPP4R3AQ6IN85 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PPP4R3AQ6IN85 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.38■□□□□ 0.69
PPP4R3AQ6IN85 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.38■□□□□ 0.69
PPP4R3AQ6IN85 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.38■□□□□ 0.69
PPP4R3AQ6IN85 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.38■□□□□ 0.69
PPP4R3AQ6IN85 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PPP4R3AQ6IN85 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.37■□□□□ 0.69
PPP4R3AQ6IN85 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PPP4R3AQ6IN85 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PPP4R3AQ6IN85 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PPP4R3AQ6IN85 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.37■□□□□ 0.69
PPP4R3AQ6IN85 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PPP4R3AQ6IN85 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PPP4R3AQ6IN85 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PPP4R3AQ6IN85 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.37■□□□□ 0.69
PPP4R3AQ6IN85 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.37■□□□□ 0.69
PPP4R3AQ6IN85 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.37■□□□□ 0.69
PPP4R3AQ6IN85 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.37■□□□□ 0.69
PPP4R3AQ6IN85 AL590627.1-203ENST00000421194 1026 ntBASIC19.37■□□□□ 0.69
PPP4R3AQ6IN85 AC087163.2-201ENST00000457299 853 ntBASIC19.37■□□□□ 0.69
PPP4R3AQ6IN85 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PPP4R3AQ6IN85 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
PPP4R3AQ6IN85 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.37■□□□□ 0.69
PPP4R3AQ6IN85 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PPP4R3AQ6IN85 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PPP4R3AQ6IN85 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PPP4R3AQ6IN85 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PPP4R3AQ6IN85 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PPP4R3AQ6IN85 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PPP4R3AQ6IN85 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.36■□□□□ 0.69
PPP4R3AQ6IN85 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
PPP4R3AQ6IN85 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
PPP4R3AQ6IN85 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PPP4R3AQ6IN85 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
PPP4R3AQ6IN85 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PPP4R3AQ6IN85 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PPP4R3AQ6IN85 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.36■□□□□ 0.69
PPP4R3AQ6IN85 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
PPP4R3AQ6IN85 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PPP4R3AQ6IN85 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PPP4R3AQ6IN85 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PPP4R3AQ6IN85 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.36■□□□□ 0.69
PPP4R3AQ6IN85 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.36■□□□□ 0.69
PPP4R3AQ6IN85 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.36■□□□□ 0.69
PPP4R3AQ6IN85 AC108073.2-201ENST00000464002 357 ntBASIC19.36■□□□□ 0.69
PPP4R3AQ6IN85 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.36■□□□□ 0.69
PPP4R3AQ6IN85 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms