Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD4Q5XG99 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.63■□□□□ 0.25
LYSMD4Q5XG99 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD4Q5XG99 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
LYSMD4Q5XG99 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD4Q5XG99 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.63■□□□□ 0.25
LYSMD4Q5XG99 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.63■□□□□ 0.25
LYSMD4Q5XG99 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.63■□□□□ 0.25
LYSMD4Q5XG99 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.63■□□□□ 0.25
LYSMD4Q5XG99 SPDYE22P-201ENST00000582158 798 ntBASIC16.63■□□□□ 0.25
LYSMD4Q5XG99 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.63■□□□□ 0.25
LYSMD4Q5XG99 AC018529.1-201ENST00000613063 361 ntBASIC16.63■□□□□ 0.25
LYSMD4Q5XG99 AL590560.3-201ENST00000623350 461 ntBASIC16.63■□□□□ 0.25
LYSMD4Q5XG99 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.63■□□□□ 0.25
LYSMD4Q5XG99 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD4Q5XG99 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD4Q5XG99 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
LYSMD4Q5XG99 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.63■□□□□ 0.25
LYSMD4Q5XG99 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
LYSMD4Q5XG99 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.63■□□□□ 0.25
LYSMD4Q5XG99 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD4Q5XG99 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD4Q5XG99 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD4Q5XG99 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD4Q5XG99 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.63■□□□□ 0.25
LYSMD4Q5XG99 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LYSMD4Q5XG99 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD4Q5XG99 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD4Q5XG99 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD4Q5XG99 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
LYSMD4Q5XG99 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD4Q5XG99 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD4Q5XG99 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD4Q5XG99 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.62■□□□□ 0.25
LYSMD4Q5XG99 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.62■□□□□ 0.25
LYSMD4Q5XG99 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD4Q5XG99 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
LYSMD4Q5XG99 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD4Q5XG99 TNXA-203ENST00000507684 2038 ntBASIC16.62■□□□□ 0.25
LYSMD4Q5XG99 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD4Q5XG99 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
LYSMD4Q5XG99 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.62■□□□□ 0.25
LYSMD4Q5XG99 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
LYSMD4Q5XG99 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD4Q5XG99 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD4Q5XG99 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD4Q5XG99 MRPS18AP1-201ENST00000414458 589 ntBASIC16.62■□□□□ 0.25
LYSMD4Q5XG99 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
LYSMD4Q5XG99 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.62■□□□□ 0.25
LYSMD4Q5XG99 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.62■□□□□ 0.25
LYSMD4Q5XG99 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.62■□□□□ 0.25
LYSMD4Q5XG99 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.62■□□□□ 0.25
LYSMD4Q5XG99 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
LYSMD4Q5XG99 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.62■□□□□ 0.25
LYSMD4Q5XG99 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.62■□□□□ 0.25
LYSMD4Q5XG99 AL008721.1-201ENST00000609964 604 ntBASIC16.62■□□□□ 0.25
LYSMD4Q5XG99 AC003101.2-201ENST00000612557 442 ntBASIC16.62■□□□□ 0.25
LYSMD4Q5XG99 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.62■□□□□ 0.25
LYSMD4Q5XG99 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD4Q5XG99 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD4Q5XG99 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.62■□□□□ 0.25
LYSMD4Q5XG99 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD4Q5XG99 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD4Q5XG99 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD4Q5XG99 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD4Q5XG99 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.62■□□□□ 0.25
LYSMD4Q5XG99 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LYSMD4Q5XG99 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD4Q5XG99 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD4Q5XG99 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD4Q5XG99 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD4Q5XG99 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD4Q5XG99 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD4Q5XG99 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD4Q5XG99 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
LYSMD4Q5XG99 AC022144.1-201ENST00000602255 1580 ntBASIC16.61■□□□□ 0.25
LYSMD4Q5XG99 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
LYSMD4Q5XG99 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LYSMD4Q5XG99 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.61■□□□□ 0.25
LYSMD4Q5XG99 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD4Q5XG99 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD4Q5XG99 OR8S1-201ENST00000310194 1080 ntBASIC16.61■□□□□ 0.25
LYSMD4Q5XG99 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.61■□□□□ 0.25
LYSMD4Q5XG99 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.61■□□□□ 0.25
LYSMD4Q5XG99 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD4Q5XG99 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.61■□□□□ 0.25
LYSMD4Q5XG99 RN7SL692P-201ENST00000464677 288 ntBASIC16.61■□□□□ 0.25
LYSMD4Q5XG99 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.61■□□□□ 0.25
LYSMD4Q5XG99 AC105233.2-201ENST00000523697 349 ntBASIC16.61■□□□□ 0.25
LYSMD4Q5XG99 AF228730.5-201ENST00000530288 346 ntBASIC16.61■□□□□ 0.25
LYSMD4Q5XG99 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.61■□□□□ 0.25
LYSMD4Q5XG99 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD4Q5XG99 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD4Q5XG99 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
LYSMD4Q5XG99 AL596325.1-201ENST00000563991 1082 ntBASIC16.61■□□□□ 0.25
LYSMD4Q5XG99 RARRES2P9-201ENST00000565168 469 ntBASIC16.61■□□□□ 0.25
LYSMD4Q5XG99 AL138918.1-201ENST00000568306 659 ntBASIC16.61■□□□□ 0.25
LYSMD4Q5XG99 SPDYE12P-201ENST00000618416 771 ntBASIC16.61■□□□□ 0.25
LYSMD4Q5XG99 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LYSMD4Q5XG99 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms