Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC38Q5VT99 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC38Q5VT99 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.72■□□□□ 0.43
LRRC38Q5VT99 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC38Q5VT99 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
LRRC38Q5VT99 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC38Q5VT99 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.71■□□□□ 0.43
LRRC38Q5VT99 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
LRRC38Q5VT99 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC38Q5VT99 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC38Q5VT99 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.71■□□□□ 0.43
LRRC38Q5VT99 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.71■□□□□ 0.43
LRRC38Q5VT99 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC38Q5VT99 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC38Q5VT99 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC38Q5VT99 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.71■□□□□ 0.43
LRRC38Q5VT99 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC38Q5VT99 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.71■□□□□ 0.43
LRRC38Q5VT99 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.71■□□□□ 0.43
LRRC38Q5VT99 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.71■□□□□ 0.43
LRRC38Q5VT99 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.71■□□□□ 0.43
LRRC38Q5VT99 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.71■□□□□ 0.43
LRRC38Q5VT99 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC38Q5VT99 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LRRC38Q5VT99 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.71■□□□□ 0.43
LRRC38Q5VT99 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.71■□□□□ 0.43
LRRC38Q5VT99 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC38Q5VT99 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC38Q5VT99 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC38Q5VT99 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC38Q5VT99 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC38Q5VT99 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC38Q5VT99 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC38Q5VT99 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
LRRC38Q5VT99 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC38Q5VT99 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
LRRC38Q5VT99 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
LRRC38Q5VT99 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC38Q5VT99 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
LRRC38Q5VT99 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC38Q5VT99 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
LRRC38Q5VT99 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC38Q5VT99 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC38Q5VT99 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC38Q5VT99 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC38Q5VT99 HCG4P8-203ENST00000443049 980 ntBASIC17.7■□□□□ 0.42
LRRC38Q5VT99 PAWRP1-201ENST00000451083 565 ntBASIC17.7■□□□□ 0.42
LRRC38Q5VT99 FGFR3P6-201ENST00000457012 610 ntBASIC17.7■□□□□ 0.42
LRRC38Q5VT99 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
LRRC38Q5VT99 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
LRRC38Q5VT99 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.7■□□□□ 0.42
LRRC38Q5VT99 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.7■□□□□ 0.42
LRRC38Q5VT99 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC38Q5VT99 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.7■□□□□ 0.42
LRRC38Q5VT99 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.7■□□□□ 0.42
LRRC38Q5VT99 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC38Q5VT99 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.7■□□□□ 0.42
LRRC38Q5VT99 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.7■□□□□ 0.42
LRRC38Q5VT99 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC38Q5VT99 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC38Q5VT99 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC38Q5VT99 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
LRRC38Q5VT99 AC006538.1-201ENST00000567905 1585 ntBASIC17.7■□□□□ 0.42
LRRC38Q5VT99 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.7■□□□□ 0.42
LRRC38Q5VT99 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC38Q5VT99 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC38Q5VT99 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC38Q5VT99 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC38Q5VT99 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRC38Q5VT99 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC38Q5VT99 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LRRC38Q5VT99 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC38Q5VT99 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
LRRC38Q5VT99 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
LRRC38Q5VT99 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC38Q5VT99 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC38Q5VT99 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
LRRC38Q5VT99 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
LRRC38Q5VT99 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRC38Q5VT99 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC38Q5VT99 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
LRRC38Q5VT99 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRC38Q5VT99 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC38Q5VT99 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC38Q5VT99 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC38Q5VT99 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC38Q5VT99 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.69■□□□□ 0.42
LRRC38Q5VT99 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.69■□□□□ 0.42
LRRC38Q5VT99 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC38Q5VT99 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.69■□□□□ 0.42
LRRC38Q5VT99 AC139887.3-201ENST00000568585 713 ntBASIC17.69■□□□□ 0.42
LRRC38Q5VT99 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRC38Q5VT99 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRC38Q5VT99 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC38Q5VT99 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC38Q5VT99 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LRRC38Q5VT99 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC38Q5VT99 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC38Q5VT99 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LRRC38Q5VT99 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms