Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SGO1Q5FBB7 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SGO1Q5FBB7 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SGO1Q5FBB7 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SGO1Q5FBB7 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SGO1Q5FBB7 FLJ16779-201ENST00000612722 7638 ntBASIC16.65■□□□□ 0.26
SGO1Q5FBB7 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SGO1Q5FBB7 EGFEM1P-202ENST00000431685 1563 ntBASIC16.65■□□□□ 0.26
SGO1Q5FBB7 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
SGO1Q5FBB7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SGO1Q5FBB7 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SGO1Q5FBB7 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SGO1Q5FBB7 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SGO1Q5FBB7 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.65■□□□□ 0.26
SGO1Q5FBB7 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SGO1Q5FBB7 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SGO1Q5FBB7 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.65■□□□□ 0.26
SGO1Q5FBB7 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SGO1Q5FBB7 NUS1P2-201ENST00000417358 873 ntBASIC16.65■□□□□ 0.26
SGO1Q5FBB7 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SGO1Q5FBB7 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.65■□□□□ 0.26
SGO1Q5FBB7 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SGO1Q5FBB7 AC092329.2-201ENST00000598402 547 ntBASIC16.65■□□□□ 0.26
SGO1Q5FBB7 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.65■□□□□ 0.26
SGO1Q5FBB7 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SGO1Q5FBB7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SGO1Q5FBB7 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.65■□□□□ 0.26
SGO1Q5FBB7 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.65■□□□□ 0.26
SGO1Q5FBB7 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SGO1Q5FBB7 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.65■□□□□ 0.26
SGO1Q5FBB7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.65■□□□□ 0.26
SGO1Q5FBB7 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SGO1Q5FBB7 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SGO1Q5FBB7 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SGO1Q5FBB7 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SGO1Q5FBB7 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SGO1Q5FBB7 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SGO1Q5FBB7 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
SGO1Q5FBB7 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.64■□□□□ 0.26
SGO1Q5FBB7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.26
SGO1Q5FBB7 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
SGO1Q5FBB7 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SGO1Q5FBB7 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.64■□□□□ 0.25
SGO1Q5FBB7 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SGO1Q5FBB7 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SGO1Q5FBB7 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SGO1Q5FBB7 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SGO1Q5FBB7 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.64■□□□□ 0.25
SGO1Q5FBB7 RNF216P1-203ENST00000404404 2427 ntBASIC16.64■□□□□ 0.25
SGO1Q5FBB7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SGO1Q5FBB7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.64■□□□□ 0.25
SGO1Q5FBB7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SGO1Q5FBB7 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.64■□□□□ 0.25
SGO1Q5FBB7 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
SGO1Q5FBB7 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.64■□□□□ 0.25
SGO1Q5FBB7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.64■□□□□ 0.25
SGO1Q5FBB7 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.64■□□□□ 0.25
SGO1Q5FBB7 NPAP1P7-201ENST00000613027 823 ntBASIC16.64■□□□□ 0.25
SGO1Q5FBB7 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.64■□□□□ 0.25
SGO1Q5FBB7 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SGO1Q5FBB7 AC114341.1-201ENST00000618070 349 ntBASIC16.64■□□□□ 0.25
SGO1Q5FBB7 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SGO1Q5FBB7 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SGO1Q5FBB7 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.64■□□□□ 0.25
SGO1Q5FBB7 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SGO1Q5FBB7 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SGO1Q5FBB7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SGO1Q5FBB7 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SGO1Q5FBB7 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SGO1Q5FBB7 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.64■□□□□ 0.25
SGO1Q5FBB7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SGO1Q5FBB7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.64■□□□□ 0.25
SGO1Q5FBB7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.64■□□□□ 0.25
SGO1Q5FBB7 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SGO1Q5FBB7 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SGO1Q5FBB7 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SGO1Q5FBB7 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SGO1Q5FBB7 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SGO1Q5FBB7 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SGO1Q5FBB7 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SGO1Q5FBB7 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SGO1Q5FBB7 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SGO1Q5FBB7 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
SGO1Q5FBB7 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SGO1Q5FBB7 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms