Protein–RNA interactions for Protein: Q53SF7

COBLL1, Cordon-bleu protein-like 1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COBLL1Q53SF7 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COBLL1Q53SF7 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COBLL1Q53SF7 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
COBLL1Q53SF7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
COBLL1Q53SF7 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.71■□□□□ 0.59
COBLL1Q53SF7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.71■□□□□ 0.59
COBLL1Q53SF7 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COBLL1Q53SF7 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
COBLL1Q53SF7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
COBLL1Q53SF7 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
COBLL1Q53SF7 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.7■□□□□ 0.58
COBLL1Q53SF7 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
COBLL1Q53SF7 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
COBLL1Q53SF7 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
COBLL1Q53SF7 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.7■□□□□ 0.58
COBLL1Q53SF7 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COBLL1Q53SF7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COBLL1Q53SF7 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COBLL1Q53SF7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COBLL1Q53SF7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.7■□□□□ 0.58
COBLL1Q53SF7 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
COBLL1Q53SF7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.7■□□□□ 0.58
COBLL1Q53SF7 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.7■□□□□ 0.58
COBLL1Q53SF7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.7■□□□□ 0.58
COBLL1Q53SF7 AF238378.1-201ENST00000526806 358 ntBASIC18.7■□□□□ 0.58
COBLL1Q53SF7 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
COBLL1Q53SF7 PRELID1P1-202ENST00000567272 903 ntBASIC18.7■□□□□ 0.58
COBLL1Q53SF7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.7■□□□□ 0.58
COBLL1Q53SF7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
COBLL1Q53SF7 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
COBLL1Q53SF7 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COBLL1Q53SF7 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COBLL1Q53SF7 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
COBLL1Q53SF7 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COBLL1Q53SF7 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
COBLL1Q53SF7 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COBLL1Q53SF7 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.69■□□□□ 0.58
COBLL1Q53SF7 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COBLL1Q53SF7 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COBLL1Q53SF7 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
COBLL1Q53SF7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.69■□□□□ 0.58
COBLL1Q53SF7 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COBLL1Q53SF7 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COBLL1Q53SF7 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COBLL1Q53SF7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COBLL1Q53SF7 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.69■□□□□ 0.58
COBLL1Q53SF7 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.69■□□□□ 0.58
COBLL1Q53SF7 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.69■□□□□ 0.58
COBLL1Q53SF7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.69■□□□□ 0.58
COBLL1Q53SF7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.69■□□□□ 0.58
COBLL1Q53SF7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
COBLL1Q53SF7 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
COBLL1Q53SF7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COBLL1Q53SF7 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COBLL1Q53SF7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.69■□□□□ 0.58
COBLL1Q53SF7 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
COBLL1Q53SF7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COBLL1Q53SF7 LAGE3P1-201ENST00000425356 484 ntBASIC18.69■□□□□ 0.58
COBLL1Q53SF7 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
COBLL1Q53SF7 AC087163.2-201ENST00000457299 853 ntBASIC18.69■□□□□ 0.58
COBLL1Q53SF7 AC021087.4-201ENST00000563761 564 ntBASIC18.69■□□□□ 0.58
COBLL1Q53SF7 MIR4492-201ENST00000581627 80 ntBASIC18.69■□□□□ 0.58
COBLL1Q53SF7 AC107918.4-202ENST00000641623 219 ntBASIC18.69■□□□□ 0.58
COBLL1Q53SF7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
COBLL1Q53SF7 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COBLL1Q53SF7 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
COBLL1Q53SF7 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COBLL1Q53SF7 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COBLL1Q53SF7 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
COBLL1Q53SF7 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
COBLL1Q53SF7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
COBLL1Q53SF7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.69■□□□□ 0.58
COBLL1Q53SF7 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COBLL1Q53SF7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.69■□□□□ 0.58
COBLL1Q53SF7 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.69■□□□□ 0.58
COBLL1Q53SF7 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.69■□□□□ 0.58
COBLL1Q53SF7 AC002310.6-201ENST00000624451 1377 ntBASIC18.68■□□□□ 0.58
COBLL1Q53SF7 SNX33P1-201ENST00000592116 1762 ntBASIC18.68■□□□□ 0.58
COBLL1Q53SF7 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COBLL1Q53SF7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
COBLL1Q53SF7 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COBLL1Q53SF7 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COBLL1Q53SF7 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COBLL1Q53SF7 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COBLL1Q53SF7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COBLL1Q53SF7 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COBLL1Q53SF7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.68■□□□□ 0.58
COBLL1Q53SF7 PTCHD3P3-201ENST00000403073 906 ntBASIC18.68■□□□□ 0.58
COBLL1Q53SF7 KRT18P27-201ENST00000427733 1299 ntBASIC18.68■□□□□ 0.58
COBLL1Q53SF7 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.68■□□□□ 0.58
COBLL1Q53SF7 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.68■□□□□ 0.58
COBLL1Q53SF7 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COBLL1Q53SF7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.68■□□□□ 0.58
COBLL1Q53SF7 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.68■□□□□ 0.58
COBLL1Q53SF7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
COBLL1Q53SF7 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
COBLL1Q53SF7 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COBLL1Q53SF7 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COBLL1Q53SF7 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COBLL1Q53SF7 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms