Protein–RNA interactions for Protein: Q09161

NCBP1, Nuclear cap-binding protein subunit 1, humanhuman

Known RBP Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP1Q09161 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.41■□□□□ 0.7
NCBP1Q09161 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.41■□□□□ 0.7
NCBP1Q09161 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.41■□□□□ 0.7
NCBP1Q09161 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.41■□□□□ 0.7
NCBP1Q09161 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NCBP1Q09161 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NCBP1Q09161 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCBP1Q09161 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
NCBP1Q09161 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCBP1Q09161 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
NCBP1Q09161 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCBP1Q09161 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCBP1Q09161 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
NCBP1Q09161 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCBP1Q09161 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCBP1Q09161 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NCBP1Q09161 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.41■□□□□ 0.7
NCBP1Q09161 MRPL3P1-201ENST00000400109 1033 ntBASIC19.41■□□□□ 0.7
NCBP1Q09161 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.41■□□□□ 0.7
NCBP1Q09161 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.41■□□□□ 0.7
NCBP1Q09161 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.41■□□□□ 0.7
NCBP1Q09161 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
NCBP1Q09161 AP001005.1-201ENST00000571755 1248 ntBASIC19.41■□□□□ 0.7
NCBP1Q09161 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NCBP1Q09161 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NCBP1Q09161 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.41■□□□□ 0.7
NCBP1Q09161 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NCBP1Q09161 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCBP1Q09161 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCBP1Q09161 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.41■□□□□ 0.7
NCBP1Q09161 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NCBP1Q09161 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.41■□□□□ 0.7
NCBP1Q09161 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NCBP1Q09161 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCBP1Q09161 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCBP1Q09161 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
NCBP1Q09161 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.41■□□□□ 0.7
NCBP1Q09161 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCBP1Q09161 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCBP1Q09161 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCBP1Q09161 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
NCBP1Q09161 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCBP1Q09161 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NCBP1Q09161 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NCBP1Q09161 AC010460.3-201ENST00000511359 1579 ntBASIC19.4■□□□□ 0.7
NCBP1Q09161 AL138688.1-201ENST00000624851 1594 ntBASIC19.4■□□□□ 0.7
NCBP1Q09161 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCBP1Q09161 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NCBP1Q09161 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCBP1Q09161 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCBP1Q09161 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NCBP1Q09161 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCBP1Q09161 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NCBP1Q09161 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NCBP1Q09161 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCBP1Q09161 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCBP1Q09161 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCBP1Q09161 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.4■□□□□ 0.7
NCBP1Q09161 RNPS1P1-201ENST00000507437 918 ntBASIC19.4■□□□□ 0.7
NCBP1Q09161 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.4■□□□□ 0.7
NCBP1Q09161 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.4■□□□□ 0.7
NCBP1Q09161 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.4■□□□□ 0.7
NCBP1Q09161 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.4■□□□□ 0.7
NCBP1Q09161 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
NCBP1Q09161 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.4■□□□□ 0.7
NCBP1Q09161 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.4■□□□□ 0.7
NCBP1Q09161 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCBP1Q09161 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.4■□□□□ 0.7
NCBP1Q09161 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NCBP1Q09161 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC19.39■□□□□ 0.7
NCBP1Q09161 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NCBP1Q09161 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NCBP1Q09161 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
NCBP1Q09161 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NCBP1Q09161 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NCBP1Q09161 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NCBP1Q09161 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
NCBP1Q09161 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NCBP1Q09161 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NCBP1Q09161 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NCBP1Q09161 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
NCBP1Q09161 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.39■□□□□ 0.69
NCBP1Q09161 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.39■□□□□ 0.69
NCBP1Q09161 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NCBP1Q09161 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.39■□□□□ 0.69
NCBP1Q09161 TP73-AS1-207ENST00000624167 988 ntBASIC19.39■□□□□ 0.69
NCBP1Q09161 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NCBP1Q09161 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NCBP1Q09161 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
NCBP1Q09161 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NCBP1Q09161 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.39■□□□□ 0.69
NCBP1Q09161 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC19.39■□□□□ 0.69
NCBP1Q09161 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NCBP1Q09161 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NCBP1Q09161 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.39■□□□□ 0.69
NCBP1Q09161 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC19.38■□□□□ 0.69
NCBP1Q09161 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.38■□□□□ 0.69
NCBP1Q09161 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NCBP1Q09161 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
NCBP1Q09161 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms