Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AP002469.2-201ENST00000531724 424 ntBASIC14.82□□□□□ -0.04
UBA52P62987 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.82□□□□□ -0.04
UBA52P62987 AL662844.1-201ENST00000546340 181 ntBASIC14.82□□□□□ -0.04
UBA52P62987 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.82□□□□□ -0.04
UBA52P62987 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.82□□□□□ -0.04
UBA52P62987 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.82□□□□□ -0.04
UBA52P62987 Z69720.1-201ENST00000601483 472 ntBASIC14.82□□□□□ -0.04
UBA52P62987 GPALPP1-207ENST00000611650 899 ntBASIC14.82□□□□□ -0.04
UBA52P62987 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.82□□□□□ -0.04
UBA52P62987 AC023511.2-201ENST00000618803 211 ntBASIC14.82□□□□□ -0.04
UBA52P62987 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.82□□□□□ -0.04
UBA52P62987 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UBA52P62987 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBA52P62987 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBA52P62987 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC14.82□□□□□ -0.04
UBA52P62987 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.82□□□□□ -0.04
UBA52P62987 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBA52P62987 PHGDH-209ENST00000641074 1780 ntBASIC14.82□□□□□ -0.04
UBA52P62987 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.82□□□□□ -0.04
UBA52P62987 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBA52P62987 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
UBA52P62987 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.82□□□□□ -0.04
UBA52P62987 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBA52P62987 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBA52P62987 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.82□□□□□ -0.04
UBA52P62987 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.82□□□□□ -0.04
UBA52P62987 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
UBA52P62987 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBA52P62987 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBA52P62987 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
UBA52P62987 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC14.82□□□□□ -0.04
UBA52P62987 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBA52P62987 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
UBA52P62987 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.82□□□□□ -0.04
UBA52P62987 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
UBA52P62987 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.81□□□□□ -0.04
UBA52P62987 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
UBA52P62987 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
UBA52P62987 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UBA52P62987 HYMAI-201ENST00000635591 3347 ntBASIC14.81□□□□□ -0.04
UBA52P62987 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.81□□□□□ -0.04
UBA52P62987 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
UBA52P62987 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBA52P62987 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBA52P62987 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBA52P62987 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBA52P62987 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
UBA52P62987 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC14.81□□□□□ -0.04
UBA52P62987 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBA52P62987 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBA52P62987 AL357033.4-201ENST00000617703 1807 ntBASIC14.81□□□□□ -0.04
UBA52P62987 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.81□□□□□ -0.04
UBA52P62987 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBA52P62987 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBA52P62987 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBA52P62987 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UBA52P62987 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBA52P62987 SNCG-201ENST00000348795 684 ntTSL 2 BASIC14.81□□□□□ -0.04
UBA52P62987 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UBA52P62987 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.81□□□□□ -0.04
UBA52P62987 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBA52P62987 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
UBA52P62987 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.81□□□□□ -0.04
UBA52P62987 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UBA52P62987 AC079776.4-201ENST00000511039 504 ntBASIC14.81□□□□□ -0.04
UBA52P62987 AC106795.1-205ENST00000512851 1056 ntBASIC14.81□□□□□ -0.04
UBA52P62987 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.81□□□□□ -0.04
UBA52P62987 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC14.81□□□□□ -0.04
UBA52P62987 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.81□□□□□ -0.04
UBA52P62987 AC099336.1-202ENST00000602961 463 ntBASIC14.81□□□□□ -0.04
UBA52P62987 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UBA52P62987 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC14.81□□□□□ -0.04
UBA52P62987 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC14.81□□□□□ -0.04
UBA52P62987 LINC00167-201ENST00000530583 1419 ntBASIC14.81□□□□□ -0.04
UBA52P62987 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.81□□□□□ -0.04
UBA52P62987 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UBA52P62987 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UBA52P62987 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBA52P62987 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
UBA52P62987 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBA52P62987 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
UBA52P62987 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
UBA52P62987 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC14.81□□□□□ -0.04
UBA52P62987 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
UBA52P62987 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
UBA52P62987 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
UBA52P62987 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBA52P62987 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.8□□□□□ -0.04
UBA52P62987 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UBA52P62987 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.8□□□□□ -0.04
UBA52P62987 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBA52P62987 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBA52P62987 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.8□□□□□ -0.04
UBA52P62987 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UBA52P62987 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
UBA52P62987 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
UBA52P62987 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBA52P62987 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBA52P62987 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBA52P62987 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms