Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CHMP4BP1P59074 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP4BP1P59074 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.56■□□□□ 0.72
CHMP4BP1P59074 AC211486.1-202ENST00000416371 468 ntBASIC19.56■□□□□ 0.72
CHMP4BP1P59074 AC108073.2-201ENST00000464002 357 ntBASIC19.56■□□□□ 0.72
CHMP4BP1P59074 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.56■□□□□ 0.72
CHMP4BP1P59074 AC211476.1-201ENST00000503899 468 ntBASIC19.56■□□□□ 0.72
CHMP4BP1P59074 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.56■□□□□ 0.72
CHMP4BP1P59074 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.56■□□□□ 0.72
CHMP4BP1P59074 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.56■□□□□ 0.72
CHMP4BP1P59074 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.56■□□□□ 0.72
CHMP4BP1P59074 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP4BP1P59074 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP4BP1P59074 NKILA-202ENST00000614771 2598 ntBASIC19.56■□□□□ 0.72
CHMP4BP1P59074 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.56■□□□□ 0.72
CHMP4BP1P59074 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP4BP1P59074 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP4BP1P59074 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CHMP4BP1P59074 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP4BP1P59074 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.56■□□□□ 0.72
CHMP4BP1P59074 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP4BP1P59074 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP4BP1P59074 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP4BP1P59074 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP4BP1P59074 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP4BP1P59074 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP4BP1P59074 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP4BP1P59074 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
CHMP4BP1P59074 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP4BP1P59074 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP4BP1P59074 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP4BP1P59074 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP4BP1P59074 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.55■□□□□ 0.72
CHMP4BP1P59074 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP4BP1P59074 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP4BP1P59074 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP4BP1P59074 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.55■□□□□ 0.72
CHMP4BP1P59074 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CHMP4BP1P59074 PMS2P2-201ENST00000425039 1128 ntBASIC19.55■□□□□ 0.72
CHMP4BP1P59074 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP4BP1P59074 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP4BP1P59074 NCF1C-201ENST00000438382 1427 ntBASIC19.55■□□□□ 0.72
CHMP4BP1P59074 DNAJB3-202ENST00000449667 1266 ntBASIC19.55■□□□□ 0.72
CHMP4BP1P59074 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.55■□□□□ 0.72
CHMP4BP1P59074 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.55■□□□□ 0.72
CHMP4BP1P59074 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.55■□□□□ 0.72
CHMP4BP1P59074 AC116407.2-201ENST00000613639 860 ntBASIC19.55■□□□□ 0.72
CHMP4BP1P59074 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP4BP1P59074 AC004790.2-201ENST00000623588 572 ntBASIC19.55■□□□□ 0.72
CHMP4BP1P59074 AC092865.6-201ENST00000642101 219 ntBASIC19.55■□□□□ 0.72
CHMP4BP1P59074 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CHMP4BP1P59074 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP4BP1P59074 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.55■□□□□ 0.72
CHMP4BP1P59074 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP4BP1P59074 AC011676.5-201ENST00000624864 2660 ntBASIC19.55■□□□□ 0.72
CHMP4BP1P59074 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP4BP1P59074 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP4BP1P59074 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP4BP1P59074 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP4BP1P59074 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHMP4BP1P59074 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP4BP1P59074 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP4BP1P59074 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP4BP1P59074 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP4BP1P59074 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CHMP4BP1P59074 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CHMP4BP1P59074 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.54■□□□□ 0.72
CHMP4BP1P59074 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.54■□□□□ 0.72
CHMP4BP1P59074 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.54■□□□□ 0.72
CHMP4BP1P59074 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP4BP1P59074 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP4BP1P59074 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP4BP1P59074 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
CHMP4BP1P59074 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.54■□□□□ 0.72
CHMP4BP1P59074 STK19B-204ENST00000512515 211 ntBASIC19.54■□□□□ 0.72
CHMP4BP1P59074 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.54■□□□□ 0.72
CHMP4BP1P59074 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CHMP4BP1P59074 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
CHMP4BP1P59074 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.54■□□□□ 0.72
CHMP4BP1P59074 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP4BP1P59074 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP4BP1P59074 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP4BP1P59074 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
CHMP4BP1P59074 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP4BP1P59074 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CHMP4BP1P59074 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.54■□□□□ 0.72
CHMP4BP1P59074 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.54■□□□□ 0.72
CHMP4BP1P59074 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP4BP1P59074 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.54■□□□□ 0.72
CHMP4BP1P59074 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.54■□□□□ 0.72
CHMP4BP1P59074 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP4BP1P59074 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP4BP1P59074 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.54■□□□□ 0.72
CHMP4BP1P59074 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP4BP1P59074 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHMP4BP1P59074 AC097637.2-201ENST00000624096 1997 ntBASIC19.53■□□□□ 0.72
CHMP4BP1P59074 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CHMP4BP1P59074 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CHMP4BP1P59074 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHMP4BP1P59074 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms