Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN12P56749 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.91□□□□□ -0.02
CLDN12P56749 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN12P56749 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN12P56749 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN12P56749 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.91□□□□□ -0.02
CLDN12P56749 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN12P56749 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.91□□□□□ -0.02
CLDN12P56749 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN12P56749 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN12P56749 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CLDN12P56749 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN12P56749 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN12P56749 HLA-A-202ENST00000376806 1854 ntBASIC14.91□□□□□ -0.02
CLDN12P56749 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN12P56749 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN12P56749 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDN12P56749 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.91□□□□□ -0.02
CLDN12P56749 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.9□□□□□ -0.02
CLDN12P56749 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN12P56749 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.9□□□□□ -0.02
CLDN12P56749 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
CLDN12P56749 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN12P56749 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.9□□□□□ -0.02
CLDN12P56749 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN12P56749 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.9□□□□□ -0.02
CLDN12P56749 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN12P56749 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CLDN12P56749 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CLDN12P56749 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN12P56749 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN12P56749 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN12P56749 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN12P56749 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN12P56749 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN12P56749 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN12P56749 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC14.9□□□□□ -0.02
CLDN12P56749 MYCLP1-201ENST00000372451 1075 ntBASIC14.9□□□□□ -0.02
CLDN12P56749 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC14.9□□□□□ -0.02
CLDN12P56749 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC14.9□□□□□ -0.02
CLDN12P56749 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC14.9□□□□□ -0.02
CLDN12P56749 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC14.9□□□□□ -0.02
CLDN12P56749 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.9□□□□□ -0.02
CLDN12P56749 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC14.9□□□□□ -0.02
CLDN12P56749 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CLDN12P56749 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC14.9□□□□□ -0.02
CLDN12P56749 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC14.9□□□□□ -0.02
CLDN12P56749 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.9□□□□□ -0.02
CLDN12P56749 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN12P56749 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.9□□□□□ -0.02
CLDN12P56749 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN12P56749 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CLDN12P56749 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN12P56749 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN12P56749 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN12P56749 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CLDN12P56749 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.9□□□□□ -0.02
CLDN12P56749 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN12P56749 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CLDN12P56749 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN12P56749 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN12P56749 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN12P56749 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN12P56749 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN12P56749 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.89□□□□□ -0.03
CLDN12P56749 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
CLDN12P56749 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN12P56749 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CLDN12P56749 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.89□□□□□ -0.03
CLDN12P56749 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.89□□□□□ -0.03
CLDN12P56749 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.89□□□□□ -0.03
CLDN12P56749 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
CLDN12P56749 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN12P56749 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN12P56749 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN12P56749 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.89□□□□□ -0.03
CLDN12P56749 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.89□□□□□ -0.03
CLDN12P56749 NFIC-211ENST00000641145 8399 ntBASIC14.89□□□□□ -0.03
CLDN12P56749 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN12P56749 MMP23A-201ENST00000234610 1017 ntBASIC14.89□□□□□ -0.03
CLDN12P56749 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
CLDN12P56749 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN12P56749 SPDYE15P-201ENST00000424157 909 ntBASIC14.89□□□□□ -0.03
CLDN12P56749 HLA-F-220ENST00000434407 884 ntBASIC14.89□□□□□ -0.03
CLDN12P56749 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC14.89□□□□□ -0.03
CLDN12P56749 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CLDN12P56749 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC14.89□□□□□ -0.03
CLDN12P56749 AP003733.1-201ENST00000491725 852 ntBASIC14.89□□□□□ -0.03
CLDN12P56749 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC14.89□□□□□ -0.03
CLDN12P56749 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
CLDN12P56749 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN12P56749 AC022188.1-201ENST00000620960 1664 ntBASIC14.89□□□□□ -0.03
CLDN12P56749 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.89□□□□□ -0.03
CLDN12P56749 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CLDN12P56749 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CLDN12P56749 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN12P56749 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN12P56749 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CLDN12P56749 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.89□□□□□ -0.03
CLDN12P56749 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms