Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PER3P56645 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PER3P56645 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.87■□□□□ 0.13
PER3P56645 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
PER3P56645 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.87■□□□□ 0.13
PER3P56645 AC254562.1-201ENST00000417586 456 ntBASIC15.87■□□□□ 0.13
PER3P56645 MCCD1P2-201ENST00000423228 335 ntBASIC15.87■□□□□ 0.13
PER3P56645 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
PER3P56645 CYMP-203ENST00000474680 1263 ntBASIC15.87■□□□□ 0.13
PER3P56645 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC15.87■□□□□ 0.13
PER3P56645 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.87■□□□□ 0.13
PER3P56645 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PER3P56645 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.87■□□□□ 0.13
PER3P56645 AC092364.2-202ENST00000597012 1073 ntBASIC15.87■□□□□ 0.13
PER3P56645 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.87■□□□□ 0.13
PER3P56645 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PER3P56645 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PER3P56645 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.87■□□□□ 0.13
PER3P56645 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PER3P56645 AC097374.2-201ENST00000618617 1306 ntBASIC15.87■□□□□ 0.13
PER3P56645 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.87■□□□□ 0.13
PER3P56645 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PER3P56645 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PER3P56645 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PER3P56645 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
PER3P56645 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.87■□□□□ 0.13
PER3P56645 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PER3P56645 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
PER3P56645 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PER3P56645 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PER3P56645 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PER3P56645 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PER3P56645 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.86■□□□□ 0.13
PER3P56645 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PER3P56645 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PER3P56645 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PER3P56645 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.86■□□□□ 0.13
PER3P56645 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PER3P56645 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PER3P56645 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
PER3P56645 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PER3P56645 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PER3P56645 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.86■□□□□ 0.13
PER3P56645 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.86■□□□□ 0.13
PER3P56645 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
PER3P56645 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.86■□□□□ 0.13
PER3P56645 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PER3P56645 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.86■□□□□ 0.13
PER3P56645 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PER3P56645 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.86■□□□□ 0.13
PER3P56645 AC108751.1-201ENST00000490852 363 ntBASIC15.86■□□□□ 0.13
PER3P56645 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.86■□□□□ 0.13
PER3P56645 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.86■□□□□ 0.13
PER3P56645 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.86■□□□□ 0.13
PER3P56645 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.86■□□□□ 0.13
PER3P56645 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.86■□□□□ 0.13
PER3P56645 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.86■□□□□ 0.13
PER3P56645 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PER3P56645 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
PER3P56645 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PER3P56645 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PER3P56645 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PER3P56645 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.86■□□□□ 0.13
PER3P56645 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
PER3P56645 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PER3P56645 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PER3P56645 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PER3P56645 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PER3P56645 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PER3P56645 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
PER3P56645 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.86■□□□□ 0.13
PER3P56645 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PER3P56645 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.85■□□□□ 0.13
PER3P56645 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.85■□□□□ 0.13
PER3P56645 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PER3P56645 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PER3P56645 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.85■□□□□ 0.13
PER3P56645 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PER3P56645 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.85■□□□□ 0.13
PER3P56645 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PER3P56645 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
PER3P56645 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.85■□□□□ 0.13
PER3P56645 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.85■□□□□ 0.13
PER3P56645 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.85■□□□□ 0.13
PER3P56645 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PER3P56645 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PER3P56645 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.85■□□□□ 0.13
PER3P56645 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PER3P56645 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PER3P56645 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.85■□□□□ 0.13
PER3P56645 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
PER3P56645 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PER3P56645 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PER3P56645 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PER3P56645 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.85■□□□□ 0.13
PER3P56645 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PER3P56645 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PER3P56645 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.85■□□□□ 0.13
PER3P56645 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PER3P56645 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms