Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
PKNOX1P55347 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PKNOX1P55347 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PKNOX1P55347 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PKNOX1P55347 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PKNOX1P55347 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.8■□□□□ 0.28
PKNOX1P55347 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.8■□□□□ 0.28
PKNOX1P55347 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PKNOX1P55347 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PKNOX1P55347 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PKNOX1P55347 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PKNOX1P55347 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.8■□□□□ 0.28
PKNOX1P55347 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.8■□□□□ 0.28
PKNOX1P55347 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PKNOX1P55347 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PKNOX1P55347 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.8■□□□□ 0.28
PKNOX1P55347 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.8■□□□□ 0.28
PKNOX1P55347 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.8■□□□□ 0.28
PKNOX1P55347 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PKNOX1P55347 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PKNOX1P55347 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PKNOX1P55347 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.8■□□□□ 0.28
PKNOX1P55347 CHCHD2P8-201ENST00000429873 447 ntBASIC16.8■□□□□ 0.28
PKNOX1P55347 BX276092.5-203ENST00000456199 560 ntBASIC16.8■□□□□ 0.28
PKNOX1P55347 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.8■□□□□ 0.28
PKNOX1P55347 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.8■□□□□ 0.28
PKNOX1P55347 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.8■□□□□ 0.28
PKNOX1P55347 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PKNOX1P55347 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PKNOX1P55347 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.8■□□□□ 0.28
PKNOX1P55347 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PKNOX1P55347 AL662844.4-201ENST00000606367 2838 ntBASIC16.8■□□□□ 0.28
PKNOX1P55347 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PKNOX1P55347 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
PKNOX1P55347 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
PKNOX1P55347 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PKNOX1P55347 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.8■□□□□ 0.28
PKNOX1P55347 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PKNOX1P55347 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.8■□□□□ 0.28
PKNOX1P55347 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PKNOX1P55347 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PKNOX1P55347 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.79■□□□□ 0.28
PKNOX1P55347 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PKNOX1P55347 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PKNOX1P55347 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PKNOX1P55347 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.79■□□□□ 0.28
PKNOX1P55347 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
PKNOX1P55347 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PKNOX1P55347 AL135999.2-201ENST00000622438 1686 ntBASIC16.79■□□□□ 0.28
PKNOX1P55347 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PKNOX1P55347 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PKNOX1P55347 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PKNOX1P55347 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PKNOX1P55347 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PKNOX1P55347 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PKNOX1P55347 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PKNOX1P55347 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PKNOX1P55347 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.79■□□□□ 0.28
PKNOX1P55347 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PKNOX1P55347 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.79■□□□□ 0.28
PKNOX1P55347 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PKNOX1P55347 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.79■□□□□ 0.28
PKNOX1P55347 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.79■□□□□ 0.28
PKNOX1P55347 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.79■□□□□ 0.28
PKNOX1P55347 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.79■□□□□ 0.28
PKNOX1P55347 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PKNOX1P55347 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PKNOX1P55347 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PKNOX1P55347 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PKNOX1P55347 LINC00554-201ENST00000564841 3011 ntBASIC16.79■□□□□ 0.28
PKNOX1P55347 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PKNOX1P55347 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.79■□□□□ 0.28
PKNOX1P55347 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PKNOX1P55347 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.79■□□□□ 0.28
PKNOX1P55347 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.79■□□□□ 0.28
PKNOX1P55347 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PKNOX1P55347 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.79■□□□□ 0.28
PKNOX1P55347 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PKNOX1P55347 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PKNOX1P55347 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
PKNOX1P55347 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.78■□□□□ 0.28
PKNOX1P55347 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PKNOX1P55347 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PKNOX1P55347 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PKNOX1P55347 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PKNOX1P55347 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PKNOX1P55347 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PKNOX1P55347 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PKNOX1P55347 AL596257.1-201ENST00000641463 2694 ntBASIC16.78■□□□□ 0.28
PKNOX1P55347 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PKNOX1P55347 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PKNOX1P55347 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PKNOX1P55347 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
PKNOX1P55347 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PKNOX1P55347 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PKNOX1P55347 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PKNOX1P55347 AL031133.1-201ENST00000406807 723 ntBASIC16.78■□□□□ 0.28
PKNOX1P55347 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.78■□□□□ 0.28
PKNOX1P55347 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.78■□□□□ 0.28
PKNOX1P55347 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms