Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1A1P48729 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CSNK1A1P48729 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1A1P48729 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1A1P48729 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.22■□□□□ 0.03
CSNK1A1P48729 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1A1P48729 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.22■□□□□ 0.03
CSNK1A1P48729 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.22■□□□□ 0.03
CSNK1A1P48729 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.22■□□□□ 0.03
CSNK1A1P48729 AL450487.1-201ENST00000426799 995 ntBASIC15.22■□□□□ 0.03
CSNK1A1P48729 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.22■□□□□ 0.03
CSNK1A1P48729 EMBP1-201ENST00000458200 901 ntBASIC15.22■□□□□ 0.03
CSNK1A1P48729 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.22■□□□□ 0.03
CSNK1A1P48729 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.22■□□□□ 0.03
CSNK1A1P48729 AC073648.2-201ENST00000510116 352 ntBASIC15.22■□□□□ 0.03
CSNK1A1P48729 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.22■□□□□ 0.03
CSNK1A1P48729 AC021087.4-201ENST00000563761 564 ntBASIC15.22■□□□□ 0.03
CSNK1A1P48729 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.22■□□□□ 0.03
CSNK1A1P48729 AL139424.1-201ENST00000607572 797 ntBASIC15.22■□□□□ 0.03
CSNK1A1P48729 AL691432.3-201ENST00000621860 400 ntBASIC15.22■□□□□ 0.03
CSNK1A1P48729 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.22■□□□□ 0.03
CSNK1A1P48729 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1A1P48729 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1A1P48729 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1A1P48729 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1A1P48729 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.22■□□□□ 0.03
CSNK1A1P48729 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1A1P48729 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1A1P48729 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CSNK1A1P48729 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1A1P48729 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
CSNK1A1P48729 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1A1P48729 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.22■□□□□ 0.03
CSNK1A1P48729 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1A1P48729 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1A1P48729 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1A1P48729 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1A1P48729 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CSNK1A1P48729 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.22■□□□□ 0.03
CSNK1A1P48729 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1A1P48729 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1A1P48729 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
CSNK1A1P48729 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.21■□□□□ 0.03
CSNK1A1P48729 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CSNK1A1P48729 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1A1P48729 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1A1P48729 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1A1P48729 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1A1P48729 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1A1P48729 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.21■□□□□ 0.03
CSNK1A1P48729 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1A1P48729 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.21■□□□□ 0.03
CSNK1A1P48729 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1A1P48729 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.21■□□□□ 0.03
CSNK1A1P48729 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CSNK1A1P48729 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1A1P48729 AC004870.1-201ENST00000315132 882 ntBASIC15.21■□□□□ 0.03
CSNK1A1P48729 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1A1P48729 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.21■□□□□ 0.03
CSNK1A1P48729 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1A1P48729 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CSNK1A1P48729 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.21■□□□□ 0.03
CSNK1A1P48729 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1A1P48729 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1A1P48729 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.21■□□□□ 0.03
CSNK1A1P48729 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CSNK1A1P48729 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1A1P48729 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1A1P48729 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1A1P48729 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CSNK1A1P48729 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CSNK1A1P48729 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.21■□□□□ 0.03
CSNK1A1P48729 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.21■□□□□ 0.03
CSNK1A1P48729 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.02
CSNK1A1P48729 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
CSNK1A1P48729 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CSNK1A1P48729 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CSNK1A1P48729 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CSNK1A1P48729 FER1L4-210ENST00000615531 5998 ntBASIC15.2■□□□□ 0.02
CSNK1A1P48729 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1A1P48729 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1A1P48729 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.2■□□□□ 0.02
CSNK1A1P48729 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1A1P48729 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
CSNK1A1P48729 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1A1P48729 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1A1P48729 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.2■□□□□ 0.02
CSNK1A1P48729 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1A1P48729 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1A1P48729 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.2■□□□□ 0.02
CSNK1A1P48729 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.2■□□□□ 0.02
CSNK1A1P48729 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.2■□□□□ 0.02
CSNK1A1P48729 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1A1P48729 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1A1P48729 LAGE3P1-201ENST00000425356 484 ntBASIC15.2■□□□□ 0.02
CSNK1A1P48729 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.2■□□□□ 0.02
CSNK1A1P48729 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.2■□□□□ 0.02
CSNK1A1P48729 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1A1P48729 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1A1P48729 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms