Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP8P40818 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.68■□□□□ 0.58
USP8P40818 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.68■□□□□ 0.58
USP8P40818 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
USP8P40818 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.68■□□□□ 0.58
USP8P40818 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
USP8P40818 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP8P40818 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP8P40818 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
USP8P40818 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
USP8P40818 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP8P40818 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
USP8P40818 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.67■□□□□ 0.58
USP8P40818 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP8P40818 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP8P40818 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP8P40818 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.67■□□□□ 0.58
USP8P40818 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP8P40818 AC068418.2-201ENST00000577309 3703 ntBASIC18.67■□□□□ 0.58
USP8P40818 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP8P40818 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP8P40818 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
USP8P40818 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP8P40818 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
USP8P40818 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP8P40818 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP8P40818 KLF4P1-201ENST00000412782 1185 ntBASIC18.67■□□□□ 0.58
USP8P40818 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.67■□□□□ 0.58
USP8P40818 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.67■□□□□ 0.58
USP8P40818 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.67■□□□□ 0.58
USP8P40818 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.67■□□□□ 0.58
USP8P40818 AC073592.5-201ENST00000624854 528 ntBASIC18.67■□□□□ 0.58
USP8P40818 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP8P40818 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
USP8P40818 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP8P40818 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP8P40818 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP8P40818 AC132938.5-201ENST00000624980 1813 ntBASIC18.67■□□□□ 0.58
USP8P40818 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.67■□□□□ 0.58
USP8P40818 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP8P40818 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP8P40818 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP8P40818 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP8P40818 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
USP8P40818 AC116353.5-201ENST00000638148 1699 ntBASIC18.66■□□□□ 0.58
USP8P40818 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP8P40818 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP8P40818 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP8P40818 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP8P40818 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP8P40818 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP8P40818 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP8P40818 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP8P40818 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.66■□□□□ 0.58
USP8P40818 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP8P40818 POM121L3P-201ENST00000419331 1163 ntBASIC18.66■□□□□ 0.58
USP8P40818 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.66■□□□□ 0.58
USP8P40818 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.66■□□□□ 0.58
USP8P40818 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.66■□□□□ 0.58
USP8P40818 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.66■□□□□ 0.58
USP8P40818 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.66■□□□□ 0.58
USP8P40818 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP8P40818 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP8P40818 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP8P40818 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP8P40818 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP8P40818 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP8P40818 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.66■□□□□ 0.58
USP8P40818 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP8P40818 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP8P40818 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
USP8P40818 AC093525.9-201ENST00000624961 1746 ntBASIC18.66■□□□□ 0.58
USP8P40818 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.66■□□□□ 0.58
USP8P40818 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP8P40818 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP8P40818 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
USP8P40818 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP8P40818 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP8P40818 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.65■□□□□ 0.58
USP8P40818 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.65■□□□□ 0.58
USP8P40818 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
USP8P40818 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP8P40818 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
USP8P40818 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.65■□□□□ 0.58
USP8P40818 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP8P40818 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
USP8P40818 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP8P40818 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.65■□□□□ 0.58
USP8P40818 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.65■□□□□ 0.58
USP8P40818 AD001527.2-201ENST00000622994 785 ntBASIC18.65■□□□□ 0.58
USP8P40818 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.65■□□□□ 0.58
USP8P40818 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.65■□□□□ 0.58
USP8P40818 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
USP8P40818 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP8P40818 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
USP8P40818 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP8P40818 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
USP8P40818 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
USP8P40818 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.65■□□□□ 0.58
USP8P40818 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms