Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
GDNFP39905 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GDNFP39905 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GDNFP39905 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GDNFP39905 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.94□□□□□ -0.02
GDNFP39905 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
GDNFP39905 SLC25A1P3-201ENST00000395415 828 ntBASIC14.94□□□□□ -0.02
GDNFP39905 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
GDNFP39905 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.94□□□□□ -0.02
GDNFP39905 DUX4L26-201ENST00000489078 1255 ntBASIC14.94□□□□□ -0.02
GDNFP39905 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.94□□□□□ -0.02
GDNFP39905 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GDNFP39905 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.94□□□□□ -0.02
GDNFP39905 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.94□□□□□ -0.02
GDNFP39905 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
GDNFP39905 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
GDNFP39905 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GDNFP39905 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GDNFP39905 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GDNFP39905 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GDNFP39905 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GDNFP39905 KRT8P47-201ENST00000604727 1398 ntBASIC14.94□□□□□ -0.02
GDNFP39905 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GDNFP39905 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.94□□□□□ -0.02
GDNFP39905 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GDNFP39905 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
GDNFP39905 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GDNFP39905 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GDNFP39905 AC024909.3-201ENST00000611513 2257 ntBASIC14.94□□□□□ -0.02
GDNFP39905 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.94□□□□□ -0.02
GDNFP39905 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.93□□□□□ -0.02
GDNFP39905 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GDNFP39905 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC14.93□□□□□ -0.02
GDNFP39905 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GDNFP39905 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GDNFP39905 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
GDNFP39905 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
GDNFP39905 BX276092.7-203ENST00000637198 1536 ntBASIC14.93□□□□□ -0.02
GDNFP39905 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.93□□□□□ -0.02
GDNFP39905 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.93□□□□□ -0.02
GDNFP39905 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GDNFP39905 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GDNFP39905 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GDNFP39905 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GDNFP39905 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GDNFP39905 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GDNFP39905 COPE-203ENST00000351079 907 ntTSL 2 BASIC14.93□□□□□ -0.02
GDNFP39905 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC14.93□□□□□ -0.02
GDNFP39905 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
GDNFP39905 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.93□□□□□ -0.02
GDNFP39905 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.93□□□□□ -0.02
GDNFP39905 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC14.93□□□□□ -0.02
GDNFP39905 AC112907.2-201ENST00000448639 330 ntBASIC14.93□□□□□ -0.02
GDNFP39905 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GDNFP39905 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC14.93□□□□□ -0.02
GDNFP39905 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GDNFP39905 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC14.93□□□□□ -0.02
GDNFP39905 HYMAI.1-201ENST00000620949 238 ntBASIC14.93□□□□□ -0.02
GDNFP39905 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
GDNFP39905 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
GDNFP39905 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GDNFP39905 AC092364.2-201ENST00000596710 2692 ntBASIC14.93□□□□□ -0.02
GDNFP39905 AC092850.2-201ENST00000623821 2697 ntBASIC14.93□□□□□ -0.02
GDNFP39905 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.93□□□□□ -0.02
GDNFP39905 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.93□□□□□ -0.02
GDNFP39905 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.93□□□□□ -0.02
GDNFP39905 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.93□□□□□ -0.02
GDNFP39905 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.93□□□□□ -0.02
GDNFP39905 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GDNFP39905 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GDNFP39905 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GDNFP39905 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
GDNFP39905 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GDNFP39905 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.92□□□□□ -0.02
GDNFP39905 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GDNFP39905 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GDNFP39905 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.92□□□□□ -0.02
GDNFP39905 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GDNFP39905 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
GDNFP39905 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
GDNFP39905 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GDNFP39905 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GDNFP39905 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
GDNFP39905 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
GDNFP39905 HLA-F-220ENST00000434407 884 ntBASIC14.92□□□□□ -0.02
GDNFP39905 AC063952.2-201ENST00000498792 1227 ntBASIC14.92□□□□□ -0.02
GDNFP39905 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC14.92□□□□□ -0.02
GDNFP39905 AC022616.7-201ENST00000525383 220 ntBASIC14.92□□□□□ -0.02
GDNFP39905 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GDNFP39905 AL139327.4-201ENST00000612362 153 ntBASIC14.92□□□□□ -0.02
GDNFP39905 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
GDNFP39905 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GDNFP39905 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GDNFP39905 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GDNFP39905 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GDNFP39905 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.92□□□□□ -0.02
GDNFP39905 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
GDNFP39905 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
GDNFP39905 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GDNFP39905 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms