Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.97■□□□□ 0.47
GRIK1P39086 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
GRIK1P39086 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
GRIK1P39086 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GRIK1P39086 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.97■□□□□ 0.47
GRIK1P39086 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
GRIK1P39086 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
GRIK1P39086 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
GRIK1P39086 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GRIK1P39086 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GRIK1P39086 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GRIK1P39086 PCDHB18P-201ENST00000524813 2368 ntBASIC17.96■□□□□ 0.47
GRIK1P39086 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GRIK1P39086 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.96■□□□□ 0.47
GRIK1P39086 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GRIK1P39086 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
GRIK1P39086 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.96■□□□□ 0.47
GRIK1P39086 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
GRIK1P39086 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
GRIK1P39086 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
GRIK1P39086 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
GRIK1P39086 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GRIK1P39086 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
GRIK1P39086 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
GRIK1P39086 AC074386.1-202ENST00000463561 864 ntBASIC17.96■□□□□ 0.47
GRIK1P39086 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.96■□□□□ 0.47
GRIK1P39086 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
GRIK1P39086 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.96■□□□□ 0.47
GRIK1P39086 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GRIK1P39086 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GRIK1P39086 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.96■□□□□ 0.47
GRIK1P39086 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.96■□□□□ 0.47
GRIK1P39086 AC055717.3-201ENST00000622967 595 ntBASIC17.96■□□□□ 0.47
GRIK1P39086 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.96■□□□□ 0.47
GRIK1P39086 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.96■□□□□ 0.47
GRIK1P39086 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GRIK1P39086 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
GRIK1P39086 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.96■□□□□ 0.47
GRIK1P39086 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GRIK1P39086 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
GRIK1P39086 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.96■□□□□ 0.47
GRIK1P39086 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.96■□□□□ 0.47
GRIK1P39086 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GRIK1P39086 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
GRIK1P39086 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GRIK1P39086 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GRIK1P39086 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
GRIK1P39086 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
GRIK1P39086 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.96■□□□□ 0.46
GRIK1P39086 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
GRIK1P39086 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
GRIK1P39086 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
GRIK1P39086 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
GRIK1P39086 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
GRIK1P39086 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.95■□□□□ 0.46
GRIK1P39086 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.95■□□□□ 0.46
GRIK1P39086 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GRIK1P39086 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.95■□□□□ 0.46
GRIK1P39086 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.95■□□□□ 0.46
GRIK1P39086 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
GRIK1P39086 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GRIK1P39086 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
GRIK1P39086 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GRIK1P39086 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.95■□□□□ 0.46
GRIK1P39086 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.95■□□□□ 0.46
GRIK1P39086 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.95■□□□□ 0.46
GRIK1P39086 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GRIK1P39086 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
GRIK1P39086 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GRIK1P39086 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
GRIK1P39086 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GRIK1P39086 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GRIK1P39086 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GRIK1P39086 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.95■□□□□ 0.46
GRIK1P39086 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.95■□□□□ 0.46
GRIK1P39086 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.95■□□□□ 0.46
GRIK1P39086 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
GRIK1P39086 AC005829.1-201ENST00000570002 483 ntBASIC17.95■□□□□ 0.46
GRIK1P39086 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.95■□□□□ 0.46
GRIK1P39086 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.95■□□□□ 0.46
GRIK1P39086 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.95■□□□□ 0.46
GRIK1P39086 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GRIK1P39086 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GRIK1P39086 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GRIK1P39086 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GRIK1P39086 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GRIK1P39086 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
GRIK1P39086 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
GRIK1P39086 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
GRIK1P39086 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GRIK1P39086 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GRIK1P39086 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
GRIK1P39086 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.95■□□□□ 0.46
GRIK1P39086 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.95■□□□□ 0.46
GRIK1P39086 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.94■□□□□ 0.46
GRIK1P39086 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GRIK1P39086 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
GRIK1P39086 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
GRIK1P39086 OR6D1P-203ENST00000641209 4860 ntBASIC17.94■□□□□ 0.46
GRIK1P39086 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms