Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
GDF1P27539 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.47■□□□□ 0.07
GDF1P27539 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
GDF1P27539 GPX1P2-201ENST00000429271 606 ntBASIC15.47■□□□□ 0.07
GDF1P27539 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.47■□□□□ 0.07
GDF1P27539 AL513480.1-201ENST00000451731 511 ntBASIC15.47■□□□□ 0.07
GDF1P27539 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.47■□□□□ 0.07
GDF1P27539 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
GDF1P27539 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.47■□□□□ 0.07
GDF1P27539 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.47■□□□□ 0.07
GDF1P27539 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.47■□□□□ 0.07
GDF1P27539 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.47■□□□□ 0.07
GDF1P27539 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
GDF1P27539 AC023141.13-201ENST00000604991 943 ntBASIC15.47■□□□□ 0.07
GDF1P27539 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
GDF1P27539 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.47■□□□□ 0.07
GDF1P27539 AC139530.3-201ENST00000620344 690 ntBASIC15.47■□□□□ 0.07
GDF1P27539 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
GDF1P27539 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
GDF1P27539 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
GDF1P27539 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
GDF1P27539 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
GDF1P27539 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.47■□□□□ 0.07
GDF1P27539 LINC00896-202ENST00000609602 2128 ntBASIC15.47■□□□□ 0.07
GDF1P27539 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
GDF1P27539 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
GDF1P27539 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
GDF1P27539 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
GDF1P27539 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
GDF1P27539 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
GDF1P27539 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GDF1P27539 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
GDF1P27539 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GDF1P27539 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GDF1P27539 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GDF1P27539 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
GDF1P27539 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
GDF1P27539 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
GDF1P27539 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
GDF1P27539 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.46■□□□□ 0.07
GDF1P27539 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
GDF1P27539 KRT19P2-202ENST00000557173 1012 ntBASIC15.46■□□□□ 0.07
GDF1P27539 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.46■□□□□ 0.07
GDF1P27539 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
GDF1P27539 AC116353.5-201ENST00000638148 1699 ntBASIC15.46■□□□□ 0.07
GDF1P27539 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GDF1P27539 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
GDF1P27539 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
GDF1P27539 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
GDF1P27539 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
GDF1P27539 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
GDF1P27539 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
GDF1P27539 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.46■□□□□ 0.06
GDF1P27539 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.46■□□□□ 0.06
GDF1P27539 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
GDF1P27539 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.06
GDF1P27539 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GDF1P27539 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
GDF1P27539 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
GDF1P27539 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
GDF1P27539 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GDF1P27539 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.45■□□□□ 0.06
GDF1P27539 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.45■□□□□ 0.06
GDF1P27539 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
GDF1P27539 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.45■□□□□ 0.06
GDF1P27539 AC025580.3-201ENST00000617932 1424 ntBASIC15.45■□□□□ 0.06
GDF1P27539 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GDF1P27539 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.45■□□□□ 0.06
GDF1P27539 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GDF1P27539 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
GDF1P27539 RPSAP43-201ENST00000402237 625 ntBASIC15.45■□□□□ 0.06
GDF1P27539 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.45■□□□□ 0.06
GDF1P27539 RHOQP3-201ENST00000437982 621 ntBASIC15.45■□□□□ 0.06
GDF1P27539 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
GDF1P27539 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
GDF1P27539 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
GDF1P27539 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.45■□□□□ 0.06
GDF1P27539 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.45■□□□□ 0.06
GDF1P27539 PDPK2P-202ENST00000562415 1191 ntBASIC15.45■□□□□ 0.06
GDF1P27539 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.45■□□□□ 0.06
GDF1P27539 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.45■□□□□ 0.06
GDF1P27539 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.45■□□□□ 0.06
GDF1P27539 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GDF1P27539 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GDF1P27539 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
GDF1P27539 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
GDF1P27539 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
GDF1P27539 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.45■□□□□ 0.06
GDF1P27539 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
GDF1P27539 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.45■□□□□ 0.06
GDF1P27539 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
GDF1P27539 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.45■□□□□ 0.06
GDF1P27539 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
GDF1P27539 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
GDF1P27539 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
GDF1P27539 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.44■□□□□ 0.06
GDF1P27539 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
GDF1P27539 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
GDF1P27539 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
GDF1P27539 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms