Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
KCNA3P22001 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
KCNA3P22001 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.67■□□□□ 0.9
KCNA3P22001 AC131009.4-201ENST00000624048 1740 ntBASIC20.67■□□□□ 0.9
KCNA3P22001 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC20.67■□□□□ 0.9
KCNA3P22001 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KCNA3P22001 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
KCNA3P22001 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
KCNA3P22001 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KCNA3P22001 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC20.67■□□□□ 0.9
KCNA3P22001 FAM86MP-201ENST00000340703 885 ntBASIC20.67■□□□□ 0.9
KCNA3P22001 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC20.67■□□□□ 0.9
KCNA3P22001 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
KCNA3P22001 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC20.67■□□□□ 0.9
KCNA3P22001 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
KCNA3P22001 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KCNA3P22001 DOC2GP-202ENST00000514950 1163 ntBASIC20.67■□□□□ 0.9
KCNA3P22001 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.67■□□□□ 0.9
KCNA3P22001 MPDU1-223ENST00000582151 728 ntBASIC20.67■□□□□ 0.9
KCNA3P22001 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC20.67■□□□□ 0.9
KCNA3P22001 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC20.67■□□□□ 0.9
KCNA3P22001 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KCNA3P22001 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
KCNA3P22001 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC20.67■□□□□ 0.9
KCNA3P22001 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
KCNA3P22001 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KCNA3P22001 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KCNA3P22001 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
KCNA3P22001 FAM220BP-201ENST00000377689 816 ntBASIC20.66■□□□□ 0.9
KCNA3P22001 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC20.66■□□□□ 0.9
KCNA3P22001 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
KCNA3P22001 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
KCNA3P22001 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KCNA3P22001 AL353705.2-201ENST00000428243 662 ntBASIC20.66■□□□□ 0.9
KCNA3P22001 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC20.66■□□□□ 0.9
KCNA3P22001 CD81-207ENST00000481687 890 ntTSL 2 BASIC20.66■□□□□ 0.9
KCNA3P22001 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC20.66■□□□□ 0.9
KCNA3P22001 FUZ-207ENST00000526575 482 ntTSL 4 BASIC20.66■□□□□ 0.9
KCNA3P22001 AL079307.3-201ENST00000556114 283 ntBASIC20.66■□□□□ 0.9
KCNA3P22001 AC105021.1-202ENST00000570572 669 ntBASIC20.66■□□□□ 0.9
KCNA3P22001 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC20.66■□□□□ 0.9
KCNA3P22001 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
KCNA3P22001 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC20.66■□□□□ 0.9
KCNA3P22001 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC20.66■□□□□ 0.9
KCNA3P22001 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KCNA3P22001 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC20.66■□□□□ 0.9
KCNA3P22001 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KCNA3P22001 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KCNA3P22001 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KCNA3P22001 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KCNA3P22001 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.66■□□□□ 0.9
KCNA3P22001 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KCNA3P22001 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.65■□□□□ 0.9
KCNA3P22001 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.65■□□□□ 0.9
KCNA3P22001 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
KCNA3P22001 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KCNA3P22001 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KCNA3P22001 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KCNA3P22001 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC20.65■□□□□ 0.9
KCNA3P22001 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC20.65■□□□□ 0.9
KCNA3P22001 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC20.65■□□□□ 0.9
KCNA3P22001 AC093004.1-201ENST00000508850 424 ntBASIC20.65■□□□□ 0.9
KCNA3P22001 SNX29P1-201ENST00000548357 1007 ntBASIC20.65■□□□□ 0.9
KCNA3P22001 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC20.65■□□□□ 0.9
KCNA3P22001 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC20.65■□□□□ 0.9
KCNA3P22001 MIR6775-201ENST00000617557 69 ntBASIC20.65■□□□□ 0.9
KCNA3P22001 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KCNA3P22001 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
KCNA3P22001 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
KCNA3P22001 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.65■□□□□ 0.9
KCNA3P22001 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
KCNA3P22001 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.65■□□□□ 0.9
KCNA3P22001 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
KCNA3P22001 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
KCNA3P22001 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC20.64■□□□□ 0.9
KCNA3P22001 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KCNA3P22001 SLC7A15P-201ENST00000424028 1363 ntBASIC20.64■□□□□ 0.89
KCNA3P22001 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
KCNA3P22001 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KCNA3P22001 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KCNA3P22001 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC20.64■□□□□ 0.89
KCNA3P22001 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC20.64■□□□□ 0.89
KCNA3P22001 TMEM14DP-201ENST00000422205 345 ntBASIC20.64■□□□□ 0.89
KCNA3P22001 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC20.64■□□□□ 0.89
KCNA3P22001 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC20.64■□□□□ 0.89
KCNA3P22001 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
KCNA3P22001 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC20.64■□□□□ 0.89
KCNA3P22001 AC007431.3-201ENST00000623221 587 ntBASIC20.64■□□□□ 0.89
KCNA3P22001 COX11-210ENST00000639671 696 ntBASIC20.64■□□□□ 0.89
KCNA3P22001 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KCNA3P22001 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KCNA3P22001 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
KCNA3P22001 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KCNA3P22001 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
KCNA3P22001 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC20.64■□□□□ 0.89
KCNA3P22001 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KCNA3P22001 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KCNA3P22001 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
KCNA3P22001 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNA3P22001 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms