Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCNAP12004 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCNAP12004 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCNAP12004 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCNAP12004 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.69■□□□□ 0.26
PCNAP12004 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCNAP12004 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCNAP12004 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PCNAP12004 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCNAP12004 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCNAP12004 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.69■□□□□ 0.26
PCNAP12004 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCNAP12004 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PCNAP12004 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCNAP12004 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCNAP12004 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PCNAP12004 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCNAP12004 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCNAP12004 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.69■□□□□ 0.26
PCNAP12004 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.69■□□□□ 0.26
PCNAP12004 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.69■□□□□ 0.26
PCNAP12004 MIR3652-201ENST00000579335 131 ntBASIC16.69■□□□□ 0.26
PCNAP12004 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCNAP12004 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PCNAP12004 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCNAP12004 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCNAP12004 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCNAP12004 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCNAP12004 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.69■□□□□ 0.26
PCNAP12004 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
PCNAP12004 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCNAP12004 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCNAP12004 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCNAP12004 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCNAP12004 AGGF1P2-201ENST00000426656 2106 ntBASIC16.69■□□□□ 0.26
PCNAP12004 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCNAP12004 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PCNAP12004 AL135999.2-201ENST00000622438 1686 ntBASIC16.69■□□□□ 0.26
PCNAP12004 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCNAP12004 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PCNAP12004 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.68■□□□□ 0.26
PCNAP12004 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PCNAP12004 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.68■□□□□ 0.26
PCNAP12004 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCNAP12004 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCNAP12004 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCNAP12004 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.68■□□□□ 0.26
PCNAP12004 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PCNAP12004 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCNAP12004 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCNAP12004 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.68■□□□□ 0.26
PCNAP12004 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCNAP12004 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCNAP12004 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCNAP12004 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.68■□□□□ 0.26
PCNAP12004 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCNAP12004 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCNAP12004 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
PCNAP12004 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCNAP12004 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCNAP12004 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCNAP12004 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
PCNAP12004 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCNAP12004 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.68■□□□□ 0.26
PCNAP12004 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCNAP12004 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.68■□□□□ 0.26
PCNAP12004 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PCNAP12004 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
PCNAP12004 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.68■□□□□ 0.26
PCNAP12004 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.68■□□□□ 0.26
PCNAP12004 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.68■□□□□ 0.26
PCNAP12004 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.68■□□□□ 0.26
PCNAP12004 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.68■□□□□ 0.26
PCNAP12004 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.68■□□□□ 0.26
PCNAP12004 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.68■□□□□ 0.26
PCNAP12004 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCNAP12004 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCNAP12004 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.68■□□□□ 0.26
PCNAP12004 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
PCNAP12004 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PCNAP12004 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.68■□□□□ 0.26
PCNAP12004 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.68■□□□□ 0.26
PCNAP12004 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PCNAP12004 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PCNAP12004 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PCNAP12004 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
PCNAP12004 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
PCNAP12004 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.68■□□□□ 0.26
PCNAP12004 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCNAP12004 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCNAP12004 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCNAP12004 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.67■□□□□ 0.26
PCNAP12004 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.67■□□□□ 0.26
PCNAP12004 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCNAP12004 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PCNAP12004 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.67■□□□□ 0.26
PCNAP12004 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCNAP12004 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
PCNAP12004 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCNAP12004 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms