Protein–RNA interactions for Protein: P11171

EPB41, Protein 4.1, humanhuman

Known RBP Predictions only

Length 864 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41P11171 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
EPB41P11171 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
EPB41P11171 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
EPB41P11171 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
EPB41P11171 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EPB41P11171 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EPB41P11171 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
EPB41P11171 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.75■□□□□ 0.59
EPB41P11171 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EPB41P11171 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EPB41P11171 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EPB41P11171 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.75■□□□□ 0.59
EPB41P11171 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EPB41P11171 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EPB41P11171 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
EPB41P11171 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
EPB41P11171 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.75■□□□□ 0.59
EPB41P11171 CLEC4GP1-201ENST00000596555 870 ntBASIC18.75■□□□□ 0.59
EPB41P11171 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.75■□□□□ 0.59
EPB41P11171 REXO1L6P-202ENST00000619970 1078 ntBASIC18.75■□□□□ 0.59
EPB41P11171 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
EPB41P11171 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EPB41P11171 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
EPB41P11171 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EPB41P11171 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
EPB41P11171 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
EPB41P11171 NCF1C-201ENST00000438382 1427 ntBASIC18.74■□□□□ 0.59
EPB41P11171 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EPB41P11171 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
EPB41P11171 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EPB41P11171 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EPB41P11171 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
EPB41P11171 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EPB41P11171 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
EPB41P11171 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EPB41P11171 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EPB41P11171 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EPB41P11171 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.74■□□□□ 0.59
EPB41P11171 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
EPB41P11171 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.74■□□□□ 0.59
EPB41P11171 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EPB41P11171 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EPB41P11171 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EPB41P11171 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EPB41P11171 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
EPB41P11171 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.74■□□□□ 0.59
EPB41P11171 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.74■□□□□ 0.59
EPB41P11171 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.74■□□□□ 0.59
EPB41P11171 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.74■□□□□ 0.59
EPB41P11171 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EPB41P11171 AC012313.10-201ENST00000623509 926 ntBASIC18.74■□□□□ 0.59
EPB41P11171 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
EPB41P11171 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
EPB41P11171 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EPB41P11171 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
EPB41P11171 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EPB41P11171 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
EPB41P11171 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EPB41P11171 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EPB41P11171 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
EPB41P11171 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EPB41P11171 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
EPB41P11171 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EPB41P11171 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EPB41P11171 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.73■□□□□ 0.59
EPB41P11171 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.73■□□□□ 0.59
EPB41P11171 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
EPB41P11171 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
EPB41P11171 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EPB41P11171 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
EPB41P11171 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.73■□□□□ 0.59
EPB41P11171 FGFR3P6-201ENST00000457012 610 ntBASIC18.73■□□□□ 0.59
EPB41P11171 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
EPB41P11171 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.73■□□□□ 0.59
EPB41P11171 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
EPB41P11171 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.73■□□□□ 0.59
EPB41P11171 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
EPB41P11171 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EPB41P11171 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
EPB41P11171 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
EPB41P11171 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EPB41P11171 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
EPB41P11171 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
EPB41P11171 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EPB41P11171 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
EPB41P11171 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
EPB41P11171 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EPB41P11171 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
EPB41P11171 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EPB41P11171 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.73■□□□□ 0.59
EPB41P11171 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
EPB41P11171 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
EPB41P11171 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
EPB41P11171 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.72■□□□□ 0.59
EPB41P11171 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
EPB41P11171 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
EPB41P11171 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
EPB41P11171 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.72■□□□□ 0.59
EPB41P11171 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
EPB41P11171 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms