Protein–RNA interactions for Protein: P0CJ79

ZNF888, Zinc finger protein 888, humanhuman

Predicted RBP Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF888P0CJ79 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF888P0CJ79 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF888P0CJ79 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF888P0CJ79 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF888P0CJ79 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF888P0CJ79 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.22■□□□□ 0.19
ZNF888P0CJ79 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.22■□□□□ 0.19
ZNF888P0CJ79 AC087163.2-201ENST00000457299 853 ntBASIC16.22■□□□□ 0.19
ZNF888P0CJ79 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.22■□□□□ 0.19
ZNF888P0CJ79 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.22■□□□□ 0.19
ZNF888P0CJ79 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.22■□□□□ 0.19
ZNF888P0CJ79 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.22■□□□□ 0.19
ZNF888P0CJ79 GGTLC5P-201ENST00000617623 998 ntBASIC16.22■□□□□ 0.19
ZNF888P0CJ79 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
ZNF888P0CJ79 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF888P0CJ79 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF888P0CJ79 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.22■□□□□ 0.19
ZNF888P0CJ79 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF888P0CJ79 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF888P0CJ79 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF888P0CJ79 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF888P0CJ79 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF888P0CJ79 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.22■□□□□ 0.19
ZNF888P0CJ79 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF888P0CJ79 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
ZNF888P0CJ79 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF888P0CJ79 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF888P0CJ79 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.22■□□□□ 0.19
ZNF888P0CJ79 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF888P0CJ79 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.21■□□□□ 0.19
ZNF888P0CJ79 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF888P0CJ79 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF888P0CJ79 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF888P0CJ79 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF888P0CJ79 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF888P0CJ79 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF888P0CJ79 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.21■□□□□ 0.19
ZNF888P0CJ79 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF888P0CJ79 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
ZNF888P0CJ79 AC009947.1-201ENST00000444350 727 ntBASIC16.21■□□□□ 0.19
ZNF888P0CJ79 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.21■□□□□ 0.19
ZNF888P0CJ79 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.21■□□□□ 0.19
ZNF888P0CJ79 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF888P0CJ79 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
ZNF888P0CJ79 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF888P0CJ79 BX640515.1-201ENST00000617215 977 ntBASIC16.21■□□□□ 0.19
ZNF888P0CJ79 AC004790.2-201ENST00000623588 572 ntBASIC16.21■□□□□ 0.19
ZNF888P0CJ79 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF888P0CJ79 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
ZNF888P0CJ79 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF888P0CJ79 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF888P0CJ79 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.21■□□□□ 0.19
ZNF888P0CJ79 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF888P0CJ79 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF888P0CJ79 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
ZNF888P0CJ79 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.21■□□□□ 0.19
ZNF888P0CJ79 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF888P0CJ79 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.21■□□□□ 0.19
ZNF888P0CJ79 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF888P0CJ79 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF888P0CJ79 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
ZNF888P0CJ79 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.21■□□□□ 0.18
ZNF888P0CJ79 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
ZNF888P0CJ79 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
ZNF888P0CJ79 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.21■□□□□ 0.18
ZNF888P0CJ79 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
ZNF888P0CJ79 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF888P0CJ79 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF888P0CJ79 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF888P0CJ79 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF888P0CJ79 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.2■□□□□ 0.18
ZNF888P0CJ79 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF888P0CJ79 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
ZNF888P0CJ79 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ZNF888P0CJ79 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.2■□□□□ 0.18
ZNF888P0CJ79 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF888P0CJ79 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.2■□□□□ 0.18
ZNF888P0CJ79 RPL13AP23-201ENST00000480739 586 ntBASIC16.2■□□□□ 0.18
ZNF888P0CJ79 SLC25A6P2-201ENST00000497974 877 ntBASIC16.2■□□□□ 0.18
ZNF888P0CJ79 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.2■□□□□ 0.18
ZNF888P0CJ79 SLC25A1P1-201ENST00000528351 927 ntBASIC16.2■□□□□ 0.18
ZNF888P0CJ79 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.2■□□□□ 0.18
ZNF888P0CJ79 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.2■□□□□ 0.18
ZNF888P0CJ79 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.2■□□□□ 0.18
ZNF888P0CJ79 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.2■□□□□ 0.18
ZNF888P0CJ79 MIR4751-201ENST00000578027 74 ntBASIC16.2■□□□□ 0.18
ZNF888P0CJ79 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
ZNF888P0CJ79 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
ZNF888P0CJ79 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF888P0CJ79 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF888P0CJ79 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF888P0CJ79 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
ZNF888P0CJ79 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF888P0CJ79 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF888P0CJ79 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.2■□□□□ 0.18
ZNF888P0CJ79 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF888P0CJ79 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF888P0CJ79 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF888P0CJ79 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF888P0CJ79 AC104109.2-201ENST00000602919 1418 ntBASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms