Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.04■□□□□ -0
UBCP0CG48 AC078925.2-201ENST00000624013 1973 ntBASIC15.04■□□□□ -0
UBCP0CG48 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
UBCP0CG48 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.03■□□□□ -0
UBCP0CG48 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.03■□□□□ -0
UBCP0CG48 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
UBCP0CG48 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
UBCP0CG48 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.03■□□□□ -0
UBCP0CG48 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.03■□□□□ -0
UBCP0CG48 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
UBCP0CG48 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
UBCP0CG48 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
UBCP0CG48 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
UBCP0CG48 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
UBCP0CG48 GPR89P-201ENST00000407924 1495 ntBASIC15.03■□□□□ -0
UBCP0CG48 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
UBCP0CG48 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.03■□□□□ -0
UBCP0CG48 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.03■□□□□ -0
UBCP0CG48 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
UBCP0CG48 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.03■□□□□ -0
UBCP0CG48 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.03■□□□□ -0
UBCP0CG48 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.03■□□□□ -0
UBCP0CG48 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBCP0CG48 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
UBCP0CG48 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBCP0CG48 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.03■□□□□ -0
UBCP0CG48 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBCP0CG48 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.03■□□□□ -0
UBCP0CG48 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.03■□□□□ -0
UBCP0CG48 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
UBCP0CG48 KLF4P1-201ENST00000412782 1185 ntBASIC15.03■□□□□ -0
UBCP0CG48 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.03■□□□□ -0
UBCP0CG48 AL845331.1-201ENST00000424978 1190 ntBASIC15.03■□□□□ -0
UBCP0CG48 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.03■□□□□ -0
UBCP0CG48 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.03■□□□□ -0
UBCP0CG48 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.03■□□□□ -0
UBCP0CG48 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.03■□□□□ -0
UBCP0CG48 AP002490.2-201ENST00000524791 560 ntBASIC15.03■□□□□ -0
UBCP0CG48 KRT8P26-201ENST00000534154 1276 ntBASIC15.03■□□□□ -0
UBCP0CG48 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.03■□□□□ -0
UBCP0CG48 PPOX-219ENST00000544598 813 ntTSL 2 BASIC15.03■□□□□ -0
UBCP0CG48 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
UBCP0CG48 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.03■□□□□ -0
UBCP0CG48 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBCP0CG48 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBCP0CG48 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
UBCP0CG48 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.03■□□□□ -0
UBCP0CG48 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
UBCP0CG48 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBCP0CG48 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
UBCP0CG48 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBCP0CG48 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.03■□□□□ -0
UBCP0CG48 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
UBCP0CG48 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
UBCP0CG48 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.03■□□□□ -0
UBCP0CG48 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
UBCP0CG48 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
UBCP0CG48 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
UBCP0CG48 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
UBCP0CG48 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.03■□□□□ -0
UBCP0CG48 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
UBCP0CG48 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.03■□□□□ -0
UBCP0CG48 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.03■□□□□ -0
UBCP0CG48 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.03■□□□□ -0
UBCP0CG48 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UBCP0CG48 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
UBCP0CG48 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.02■□□□□ -0
UBCP0CG48 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
UBCP0CG48 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.02■□□□□ -0
UBCP0CG48 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.02■□□□□ -0
UBCP0CG48 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.02■□□□□ -0
UBCP0CG48 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
UBCP0CG48 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.02■□□□□ -0
UBCP0CG48 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.02■□□□□ -0
UBCP0CG48 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
UBCP0CG48 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
UBCP0CG48 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.02■□□□□ -0
UBCP0CG48 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.02■□□□□ -0
UBCP0CG48 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
UBCP0CG48 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.02■□□□□ -0
UBCP0CG48 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
UBCP0CG48 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.02■□□□□ -0
UBCP0CG48 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.02■□□□□ -0
UBCP0CG48 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.02■□□□□ -0
UBCP0CG48 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.02■□□□□ -0
UBCP0CG48 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
UBCP0CG48 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC15.02■□□□□ -0
UBCP0CG48 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.02■□□□□ -0
UBCP0CG48 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
UBCP0CG48 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
UBCP0CG48 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.02□□□□□ -0.01
UBCP0CG48 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.02□□□□□ -0.01
UBCP0CG48 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
UBCP0CG48 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
UBCP0CG48 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
UBCP0CG48 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
UBCP0CG48 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
UBCP0CG48 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
UBCP0CG48 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.02□□□□□ -0.01
UBCP0CG48 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms